Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4231 |
Symbol | |
ID | 6285687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 516790 |
End bp | 517590 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642618714 |
Product | HAD-superfamily hydrolase, subfamily IIB |
Protein accession | YP_001892755 |
Protein GI | 187926410 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1877] Trehalose-6-phosphatase |
TIGRFAM ID | [TIGR00685] trehalose-phosphatase [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCCAAGA ACGTCTCTCC CCAGTCTTCT GCCAACGCGG CGCCCCTGCC CTCGCTCGAC CTGGGCCGAA CGGCCTTCCT GCTCGACTTT GACGGCACCC TCGTCGATAT CGCGCCGCAA CCCGAAGCGG TGCATGTTTC TGCGCCGCTG CGCGAAACGC TGGCCGCGCT GCATGCCGCC AGCGGGGGCG CGTTGGCGAT CATTAGCGGG CGCACGGTGC ATGACGTGGA GTCGCGCCTG TCTCTGCCCG GCCTCGTCAT CGCCGGTGTG CACGGCGCCG AACGCCGCTA TGCAGACGGC GGCTTCGTCC GCCTGAACGC TGACGCAGAT GCACTCGCGC AACTGGAGCG CGAGTTGCGC GCAGAACTCA CGCAGTTGTC GACGCAGTTT TCGGGCGTGG TGCTGGAAAG CAAGGGAATT GCGTTTGCCC TGCACTACCG CCACGCGCCT GAAGCCGAGA ACGCCGTACT GACGGTAGCG GACCGCCTCG CGCGCCGCTA TGCCGACCAC GTGCGCCTGC AGGCCGGCAA GATGGTCGCC GAACTCAAGC CGCGCGGCGC CAGCAAGGGC GACGTAGTGC ACACGCTGAT GACCGAACCG CCCTTCATGG GCCGCACGGC GCTGTTTGCC GGCGACGACC TGACCGATGA AAGCGCCTTC GATGCCGTCA ATGCGCTGGA GGGCTGGTCG ATCAAGGTGG GGACGGGCCC AAGCCAGGCG CGTTGGCGCG TGCAAGACGC GGCGGCATTG CGGGCCTGGC TGGCAACGCT CACGGCCCCG TCCAAGCGAG GTGCCGCATG A
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Protein sequence | MSKNVSPQSS ANAAPLPSLD LGRTAFLLDF DGTLVDIAPQ PEAVHVSAPL RETLAALHAA SGGALAIISG RTVHDVESRL SLPGLVIAGV HGAERRYADG GFVRLNADAD ALAQLERELR AELTQLSTQF SGVVLESKGI AFALHYRHAP EAENAVLTVA DRLARRYADH VRLQAGKMVA ELKPRGASKG DVVHTLMTEP PFMGRTALFA GDDLTDESAF DAVNALEGWS IKVGTGPSQA RWRVQDAAAL RAWLATLTAP SKRGAA
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