| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4205 |
|---|
| Symbol | |
|---|
| ID | 6285636 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010678 |
|---|
| Strand | - |
|---|
| Start bp | 485424 |
|---|
| End bp | 487586 |
|---|
| Gene Length | 2163 bp |
|---|
| Protein Length | 720 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642618688 |
|---|
| Product | acid phosphatase |
|---|
| Protein accession | YP_001892729 |
|---|
| Protein GI | 187926384 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3511] Phospholipase C |
|---|
| TIGRFAM ID | [TIGR03397] acid phosphatase, Burkholderia-type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.120661 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGAG CGCTTCGTCT TTTGCCGCTG ACCGCGTTGG TTGCTGCCAG CATGTCTGCC
TGTGGTGGCA GTGATTCGAA CAGCAGTGCC TCCGCGTCCA CCTCTGGCGT GGTGACCGGC
AGCTACTTCG AACATGCCAA AGTTTGTATC GACGCCAACA ACAACGGCAA GTGCGATTCG
GGTGAAGCCA GCACCTATAC CGATGCCAAC GGCGCGTACT CGCTGTCGGG CACGGGCGCC
ATCACCGTGG AAATCGGCAC GGACGCTTTC CGCAACGACC CGGACAAGGG TACGCATACG
GCCATCACGC AGCCGCTGGT GTTCCGCGCA CCGGCCGGTG CCAATGCTGT TGTCAGCGCC
ATCTCGACCG AACTGGCGGT GCTGATGGAC AGCAACGGCG GTGACATCAA CGCTGCCAAG
ACGGCACTGG CCGCTCGCCT TGGCGTGACG ATCGACAAGC TGCTGGAAGA CCACAACAAG
GAAACCGACG CTGACACCAA AACTGCGCTG CAGGCTGAGA TCGACCAGGC CATCGATCTG
ATCGCTGACG CCGTTGCCAA TGGTGGCGAC ATCGACAAGC GCCTGCACGA CGGGGTGACC
AAGCGCATGG CGCTGGCAAA CAACGTCAAA ACGATCGTGG TCATCTACGC AGAAAACCGC
GGTTTCGACA ACCTGTACGG CCTGTTCCCG GGCGCCAATG GCATCCCCGG TGTGAACCCG
ACCTCGACGG GCACTGCCGT TGCGCAGAAA GACTTCGACG GCTCCGTGCT GCCGACGCTG
CCGCCCACCT GGGGTGGCGT GACCGCCGCC GGCCAGAGCG TGCAGATCAC GCAGGCTTCC
ACCGCCAACA TGCCGAACCA GATGTTCCAG ATCGACAGCC CGTCGGGCTT CGGCAGCACG
GGCACGGTGG TCGGCCAGAA CGTCATCACG CGTGACCTCT GGCACCGCTT CTATCAGAAC
CAGATGCAGA TCAACGGCGG CAAGAACGAC AAGTTCGCCG CCTTTGCCGA TGCCGGCGGC
CTGACCATGG GCTACTACGA CGGCAGCAAG ATGGCCATGT GGAACATCGC CAAGCAATAC
ACGCTGGCGG ACAACTTCTT CATGGGCGCC TTCGGCGGTT CGTTCCTGAA CCACCAGTAC
CTGGTCTGCG CGTGCGCACC GATCTACCCG AACGCAAAGG CGTCGCCGGC GGTCAACAGC
ATTGCCAACG TCAAGACGAA TGCAGACGGC AGCCCGACGC TCATCCCGGC TGCAAGCTCG
GTGATGGCCG GTGCGCCGAC CTCATACGCA GGCGCTGGCG ACGATGGCAA TCCCACGAAG
GACGGCAGCC TGACGCCGGT CGACAGCAAC GGCAACTCGT ACGCCGTCAA CACGATGCAG
CCGCCGTACC AGCCCTCGGG CAACGCCGTA GCCAGCGGCA ACGCAGCCTA TGCTGATCCG
ACCAAGGCGT CGACGATGCC GAAGCAGTCG ACCACCAACA TCGGTGACCT GCTGACCGCC
CGTGGCGTGG ACTGGGCCTG GTACGCCGGC GCCTGGAACG CGGCCATCGC CGACGCTCCG
AACACCACGC GCAGCGTGAT CTACAGCGGC GCGATCCAGT TCCAGCCGCA CCACCAGCCG
TTCAACTACT TCAGCCGCTT CGACCCGGCC ACGACCACCG GCGCCGCCGA GCGTGCGGCC
CACCTGCGCG ACTACGACGC CGCCTTCCTG CAAGACGCAG CCGCAGGCAA GCTGCCCGCC
GTCACGTTCT ACAAGCCGCA AGGCAACCTG AACCAGCACC CGGGCTACGC CAATGTGGCT
GACGGCGACG CGCACATCGT CAACGTGATC GCCCAGCTGC AGAAGAGCCC GCAGTGGAAG
AACATGGTGA TCGTCGTGAC GTATGACGAA AACGGTGGCT TCTACGACCA CGCCACGGTG
CCGAAGGCCG ACCGCTGGGG CCCGGGCACG CGTATCCCGG CGATCATCGT CTCGCCGTTC
GCCAAGAAGG GTTTCGTTGA CCACACCCAG TACGACACGG CTTCGGTCCT GCGCCTGATC
ACGCACCGCT TCGACCTGCC GACGCTGCCG GGTATCAAGC AACGTGACGA CGCGCTCGTC
TCCAACGGCA ACAAGCCGAT GGGCGACCTG ACCAACGCGC TGGATTTCAC GCAGGCTCAA
TAA
|
|---|
| Protein sequence | MSRALRLLPL TALVAASMSA CGGSDSNSSA SASTSGVVTG SYFEHAKVCI DANNNGKCDS
GEASTYTDAN GAYSLSGTGA ITVEIGTDAF RNDPDKGTHT AITQPLVFRA PAGANAVVSA
ISTELAVLMD SNGGDINAAK TALAARLGVT IDKLLEDHNK ETDADTKTAL QAEIDQAIDL
IADAVANGGD IDKRLHDGVT KRMALANNVK TIVVIYAENR GFDNLYGLFP GANGIPGVNP
TSTGTAVAQK DFDGSVLPTL PPTWGGVTAA GQSVQITQAS TANMPNQMFQ IDSPSGFGST
GTVVGQNVIT RDLWHRFYQN QMQINGGKND KFAAFADAGG LTMGYYDGSK MAMWNIAKQY
TLADNFFMGA FGGSFLNHQY LVCACAPIYP NAKASPAVNS IANVKTNADG SPTLIPAASS
VMAGAPTSYA GAGDDGNPTK DGSLTPVDSN GNSYAVNTMQ PPYQPSGNAV ASGNAAYADP
TKASTMPKQS TTNIGDLLTA RGVDWAWYAG AWNAAIADAP NTTRSVIYSG AIQFQPHHQP
FNYFSRFDPA TTTGAAERAA HLRDYDAAFL QDAAAGKLPA VTFYKPQGNL NQHPGYANVA
DGDAHIVNVI AQLQKSPQWK NMVIVVTYDE NGGFYDHATV PKADRWGPGT RIPAIIVSPF
AKKGFVDHTQ YDTASVLRLI THRFDLPTLP GIKQRDDALV SNGNKPMGDL TNALDFTQAQ
|
|---|
| |