| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4197 |
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| Symbol | |
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| ID | 6285628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | + |
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| Start bp | 475223 |
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| End bp | 476500 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642618680 |
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| Product | putative D-serine deaminase (D-serine dehydratase) protein |
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| Protein accession | YP_001892721 |
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| Protein GI | 187926376 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3616] Predicted amino acid aldolase or racemase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.996717 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGATA CAAAGTACCA AGGAGACGCC AACGCTGTCG TCAACCCGCT CGACAAGGGC
TTGGGTGCGT TGGAAGCCGC ATGCGCGCCG GAGCAGATCG CTGCCCAGCG CTGGAATGTA
TTGAACGAAG ACCTGAACCT GCCCGCAGCG GTGCTCTCGC AATCCCGCGT GGAGCACAAC
CTGGCGTGGA TGCAGCGCTT CGTGAGCGAA TACGGCGCCA AACTCGCGCC GCATGGCAAG
ACGACGATGG CGCCGCGCCT GTTCCAACGT CAGTTGGCCG GCGGTGCGTG GGGCATCACA
CTGGCAACGG CGCACCAGAC GCGCATTGCG TACGCCCACG GCGTGCGTCG CGTGCTGATG
GCCAACCAGC TGGTGGGCAA GCGCAACATG GCGATCCTCG CCGAGTTGCT GGCCGATCCG
ACGTTCGAAT TCTTCTGCCT GGTGGATGCG GCGGATCAGG TCGATCAGCT TGCTGCCTTC
TTCGGTAAGA CGGGGCGCCC GATCCAGGTG TTGATCGAAC TGGGCGTGCA GGGCGGCCGC
ACGGGCGTGC GCGACGATGC GCAACTGCAA TCGGTGCTCG ATGCGCTCAC GCGTGCCAAT
GGCGCCGTCA AACTCGCGGG CGTCGAAGTC TATGAAGGCG TGATCAAGGA AGAAGCGGAT
ATCCGCACCT TCCTGCAGCG CGCCGTGAAG GTGATGGGTG ATCTGGCAAA GGGCGGGCGC
CTGCAACGCA CGCCGGCCGT GCTGACCGGT GCCGGTTCGG CTTGGTACGA CGTCGTGGCC
GAAGAGTTCG CCAAGGCCAA TATCGGCCAG CCGTTGGATG TGGTGCTGCG CCCGGGCTGC
TACCTGACGC ACGACGTGGG CATCTACCGC GCGGCGCAGA CCCGTATCGA CGCCAACAAC
CCGATTGCGC ACAAGATGCG TTCGAGCCTG CTGCCTGCGC TCCAGCTTTG GGCCTATGTG
CAATCCGTGC CGGAGGCTGA GCGCGCCATC ATCGCAATGG GCAAGCGTGA CGCCGCATTC
GACGCGGGTC TGCCACTGCC AGTGCTGCAT TTCCGCCCAG GTGACAAGAC GCCGTCAGCC
ACGCCGGCGC ACTGGGAAGT CACCGGCATG ATGGATCAGC ATGCCTACCT GAAGATCGCC
CCCGGCGACG ACATCAAGGT CGGCGACATG ATCGCCTTCG ACATCTCGCA CCCGTGCCTC
ACCTTCGACA AGTGGCGCCA GATTTCTGTC GTTGACGACG CCTACAACGT GGTCGACGTT
GTGCAGACCT ACTTCTGA
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| Protein sequence | MSDTKYQGDA NAVVNPLDKG LGALEAACAP EQIAAQRWNV LNEDLNLPAA VLSQSRVEHN
LAWMQRFVSE YGAKLAPHGK TTMAPRLFQR QLAGGAWGIT LATAHQTRIA YAHGVRRVLM
ANQLVGKRNM AILAELLADP TFEFFCLVDA ADQVDQLAAF FGKTGRPIQV LIELGVQGGR
TGVRDDAQLQ SVLDALTRAN GAVKLAGVEV YEGVIKEEAD IRTFLQRAVK VMGDLAKGGR
LQRTPAVLTG AGSAWYDVVA EEFAKANIGQ PLDVVLRPGC YLTHDVGIYR AAQTRIDANN
PIAHKMRSSL LPALQLWAYV QSVPEAERAI IAMGKRDAAF DAGLPLPVLH FRPGDKTPSA
TPAHWEVTGM MDQHAYLKIA PGDDIKVGDM IAFDISHPCL TFDKWRQISV VDDAYNVVDV
VQTYF
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