| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4193 |
|---|
| Symbol | |
|---|
| ID | 6285623 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010678 |
|---|
| Strand | - |
|---|
| Start bp | 470844 |
|---|
| End bp | 472196 |
|---|
| Gene Length | 1353 bp |
|---|
| Protein Length | 450 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642618676 |
|---|
| Product | gluconate transporter |
|---|
| Protein accession | YP_001892717 |
|---|
| Protein GI | 187926372 |
|---|
| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2610] H+/gluconate symporter and related permeases |
|---|
| TIGRFAM ID | [TIGR00791] gluconate transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.41734 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCCCGA TGCAAGGCAA CTCGCTATTG CTGACCGCCG CGCTAGCGGT GGTCGCACTG
ATTTACCTGA TTGCTGTCCA GAAACTGAAC CCGTTCGTCA CGCTGATCGT CGTCTCGCTT
GTGCTGGGCG TGGTAGTTGG CATGCCGATG GGCAACATCG TCAAGGCGTT CGAAACCGGG
GTGGGCAACA CGCTCGGCCA CATCGCCCTT GTGGTGGGCC TCGGGACGAT GCTCGGCAAG
ATGATGGCGG AATCAGGGGG TGCCGAGCGC ATCGCCAAAA CGCTCATCAG TGCCTTTGGC
GAGAAGAACG CGCACTGGGC CATGATGGTC GTGGCGTTCA TCATCGGCTT GCCGGTCTTC
TTTGAAGTCG GCTTTGTGCT GCTGATCCCG ATTGCGTTCA ACGTGGCCAA GCGCACGGGT
ACGCCGATCC TGCTGGTGGG CCTGCCAATG GTGGCCGGTC TGTCGGTGGT GCATGGCCTG
ATCCCCCCGC ACCCGGCCGC GCTGCTGGCC GTGACGGCTT ACCAGGCCGA CATCGGCAAG
ACGATCATGT ATGCGCTGAT CGTCGGCCTG CCGACTGCCA TCCTGGCCGG TCCGCTGTGG
GCGATGCTGG TCTCGCGCTA CGTCAAGCCG GACGAAAACA ACCCGCTGGC CGCCCAATTT
GTTGAAGCCG ACCAGAAGCG CGAGCTGCCG GGCTTTGGCG TGACGCTGTT CACGATCCTG
CTGCCGGTGG TGCTGATGCT GATCGGCAGC TGGGCCGACC TGATCGTCGC GCCCAAGACG
CTGGCAAACG ACATCCTGAA GCTGGCCGGC AACTCCGTGA TGGCCCTGCT GATTGCCGCC
ATCGTGAGCT TCTACACGTT CGGCAAGGCA CGCGGCTTCA ACCGCGAGAC CATCCTCAAG
TTCACCAACG AGTGTCTGGC ACCGATCGCC ACGATCACGC TGGTGGTGGG TGCGGGCGGC
GGCTTCGGCC AGATCCTGCG TGATTCGGGC GTGTCGAAGG CCATCGTGGC CGTCGCCACC
GATGCACATC TGTCGCCGCT GCTGCTGGGC TGGGTGGTGG CCGTGCTGAT CCGTATCGCT
ACGGGTTCGG CCACGGTGGC CATGACGACC GCCTGCGGTA TCGTCGCCCC GATCGCCGCC
GCCTCGGGCG CCGCCGTCAA GCCGGAGCTG ATGGTGCTGG CCACCGGCGC GGGGTCGCTG
ATCCTGTCGC ACGTGAACGA CGGTGGCTTC TGGCTGGTGA AGGAGTACTT CAACCTGACC
GTGCCGCAGA CCTTCAAGAC GTGGACGGTG CTGGAAACCA TCATCTCGAT CGTCGCGCTG
CTGCTCACGC TGGCGCTGGC GACCGTCGTT TAA
|
|---|
| Protein sequence | MVPMQGNSLL LTAALAVVAL IYLIAVQKLN PFVTLIVVSL VLGVVVGMPM GNIVKAFETG
VGNTLGHIAL VVGLGTMLGK MMAESGGAER IAKTLISAFG EKNAHWAMMV VAFIIGLPVF
FEVGFVLLIP IAFNVAKRTG TPILLVGLPM VAGLSVVHGL IPPHPAALLA VTAYQADIGK
TIMYALIVGL PTAILAGPLW AMLVSRYVKP DENNPLAAQF VEADQKRELP GFGVTLFTIL
LPVVLMLIGS WADLIVAPKT LANDILKLAG NSVMALLIAA IVSFYTFGKA RGFNRETILK
FTNECLAPIA TITLVVGAGG GFGQILRDSG VSKAIVAVAT DAHLSPLLLG WVVAVLIRIA
TGSATVAMTT ACGIVAPIAA ASGAAVKPEL MVLATGAGSL ILSHVNDGGF WLVKEYFNLT
VPQTFKTWTV LETIISIVAL LLTLALATVV
|
|---|
| |