Gene Rpic_4187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4187 
Symbol 
ID6285618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp465701 
End bp466138 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content72% 
IMG OID642618672 
Productprotein of unknown function DUF333 
Protein accessionYP_001892713 
Protein GI187926368 
COG category[R] General function prediction only 
COG ID[COG3042] Putative hemolysin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.133356 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGCG CTGTCTGTCT CGTCAAGGAT GCTGGCCAGG CCCGCATGAC CGCCGCCGTT 
GCCACGTGTG TGCTGGCGAT GGGTCTGGCA GCCTGCTCGT CGCCGATGCC TCCGTGGGAG
CCGCCGCGCA CGATCATCCA ACCCGCGCCC CCGCCGCCGA GGCCCGCACC CGCGCCGCCT
ACCCCGCTGC CACCGTCGCC TGCCATGCAG CCGGCGCCCG CCCAGCCGCC GGCCTACGCG
CCTCCGCCTG CCGGCGACAC CGAACCGCCA CGCGCAACGC CCGGCATGGC GAATCCGGCA
TCCACGTATT GCCTGCAGCG CGGCGGTCAG CTTGAGTTTT CCACGCGCGC CAACGGCGCT
GAAGTGGGAA CCTGCGTCAG CCCCGGCGGC GACGAATGCG AGGAATGGGC GTTCCTGCGC
GGCAGTTGTA CGTGGTGA
 
Protein sequence
MNRAVCLVKD AGQARMTAAV ATCVLAMGLA ACSSPMPPWE PPRTIIQPAP PPPRPAPAPP 
TPLPPSPAMQ PAPAQPPAYA PPPAGDTEPP RATPGMANPA STYCLQRGGQ LEFSTRANGA
EVGTCVSPGG DECEEWAFLR GSCTW