Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4186 |
Symbol | |
ID | 6285616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | + |
Start bp | 464308 |
End bp | 465594 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642618671 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001892712 |
Protein GI | 187926367 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.109958 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTTCA GGGCTAGATT CGACACGCTG TTCGGCCGGC TGGCCGTGCT GATCGTGGTG GTGCTCGTGC TGAGCCATTT CTCGTGGCTG GGCGTGCTGC GCGCGGAGCG GCGCGAGCGG CAGTTCCAGG CCTCGGTAGA TCAGATGGCG TTCCAGTTGC AGGCCTTTCA GGCAGCGATG GATGGTCACC TGCACGTGAA GCTGCCGGAT CTCGTGACCG AAACCGATGA GCCGCCGTCG GGCGACGCGT CGTCGGCATC GGACAAGTCT GCGGAATTGG TGCGACAGCT TGCGCGCCGC TTGCCATCGG ACACGCAGTT GCGGCTGGAA GCAGGGCCCA CGCCGCGCGT GTTCGTGCGC TTTTCGCAGC GCAACAAGTG GATTGCCATG CCGCTGGTGT GGGTGCATGC GCCGCCCAGC ATTTCGGCCG TGGTGCCGGG CGTGATGGTG GTGCTGGCGA TTGCCATTGC GTTCTCGCTG TTTGCGGCGT GGCAGATCCA GCGCCCCGTG CGCGAACTGG CCGATGCTGC GGGCGCGCTG GCACGGCGTC GCTACGTGGC ACCGCTCAAG GAGCGCGGCC CGTACGAACT CCGCCAGTTG ACCGTCCAGT TCAACCATAT GGCCGCTGAC CTGTCAGCCG CCGACGAAGA GCGCAACACT ATGCTGGCCG GCATTGCGCA CGACCTGAAG ACGCCGCTGT CACGGCTGCG CCTGCGTGCC GAAATGCTGG CCGACCAGAA AGCCGGCGCG GGTATCGAAC GCGACGTCGA ATCCATGTCG GCCATCGTCG AGCAGTTTCT CGCCTACGCG CAAAGCGGCG ACAGCGAGGC GCGCGAGGTG TCGGTCGACC GTCATCTGCG CGGCCTGGTG CAGCCGTTTG CCGAGCAGGG CAAGCATGTC GCGCTCGATC TGCATGCGGG GGACCGCTTC CGCCTCAAAC CGACCCATCT GGAGCGCATC GTCGTCAACC TGCTCGACAA CGCGTTCGCG TATGGCGCCG AGCCTGTCAA CGTGCGCACG TCGGCGGACG AGACCGGCTA CACGCTGACG GTGGAAGACC ACGGCGCGGG CATCCCCGTT GCCGACTTTG ATCGCGTCAT GCGGCCCTTT GTGCGCCTTG ACCCCGCGCG CGGCGGCAAT GCGCATTGCG GGCTCGGCTT GGCGATTGTC GATCGCCTGG TGCGTCATCT GGGCGGTGAT CTCACCGTCG GGCCAACGGC CACGGACGCG CCATCGCCGG GTTTCCGGGT CACCATGCGG TTTCCTGTCT CGACTGCGGC GGCTTGA
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Protein sequence | MKFRARFDTL FGRLAVLIVV VLVLSHFSWL GVLRAERRER QFQASVDQMA FQLQAFQAAM DGHLHVKLPD LVTETDEPPS GDASSASDKS AELVRQLARR LPSDTQLRLE AGPTPRVFVR FSQRNKWIAM PLVWVHAPPS ISAVVPGVMV VLAIAIAFSL FAAWQIQRPV RELADAAGAL ARRRYVAPLK ERGPYELRQL TVQFNHMAAD LSAADEERNT MLAGIAHDLK TPLSRLRLRA EMLADQKAGA GIERDVESMS AIVEQFLAYA QSGDSEAREV SVDRHLRGLV QPFAEQGKHV ALDLHAGDRF RLKPTHLERI VVNLLDNAFA YGAEPVNVRT SADETGYTLT VEDHGAGIPV ADFDRVMRPF VRLDPARGGN AHCGLGLAIV DRLVRHLGGD LTVGPTATDA PSPGFRVTMR FPVSTAAA
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