Gene Rpic_4186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4186 
Symbol 
ID6285616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp464308 
End bp465594 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content66% 
IMG OID642618671 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001892712 
Protein GI187926367 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.109958 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTCA GGGCTAGATT CGACACGCTG TTCGGCCGGC TGGCCGTGCT GATCGTGGTG 
GTGCTCGTGC TGAGCCATTT CTCGTGGCTG GGCGTGCTGC GCGCGGAGCG GCGCGAGCGG
CAGTTCCAGG CCTCGGTAGA TCAGATGGCG TTCCAGTTGC AGGCCTTTCA GGCAGCGATG
GATGGTCACC TGCACGTGAA GCTGCCGGAT CTCGTGACCG AAACCGATGA GCCGCCGTCG
GGCGACGCGT CGTCGGCATC GGACAAGTCT GCGGAATTGG TGCGACAGCT TGCGCGCCGC
TTGCCATCGG ACACGCAGTT GCGGCTGGAA GCAGGGCCCA CGCCGCGCGT GTTCGTGCGC
TTTTCGCAGC GCAACAAGTG GATTGCCATG CCGCTGGTGT GGGTGCATGC GCCGCCCAGC
ATTTCGGCCG TGGTGCCGGG CGTGATGGTG GTGCTGGCGA TTGCCATTGC GTTCTCGCTG
TTTGCGGCGT GGCAGATCCA GCGCCCCGTG CGCGAACTGG CCGATGCTGC GGGCGCGCTG
GCACGGCGTC GCTACGTGGC ACCGCTCAAG GAGCGCGGCC CGTACGAACT CCGCCAGTTG
ACCGTCCAGT TCAACCATAT GGCCGCTGAC CTGTCAGCCG CCGACGAAGA GCGCAACACT
ATGCTGGCCG GCATTGCGCA CGACCTGAAG ACGCCGCTGT CACGGCTGCG CCTGCGTGCC
GAAATGCTGG CCGACCAGAA AGCCGGCGCG GGTATCGAAC GCGACGTCGA ATCCATGTCG
GCCATCGTCG AGCAGTTTCT CGCCTACGCG CAAAGCGGCG ACAGCGAGGC GCGCGAGGTG
TCGGTCGACC GTCATCTGCG CGGCCTGGTG CAGCCGTTTG CCGAGCAGGG CAAGCATGTC
GCGCTCGATC TGCATGCGGG GGACCGCTTC CGCCTCAAAC CGACCCATCT GGAGCGCATC
GTCGTCAACC TGCTCGACAA CGCGTTCGCG TATGGCGCCG AGCCTGTCAA CGTGCGCACG
TCGGCGGACG AGACCGGCTA CACGCTGACG GTGGAAGACC ACGGCGCGGG CATCCCCGTT
GCCGACTTTG ATCGCGTCAT GCGGCCCTTT GTGCGCCTTG ACCCCGCGCG CGGCGGCAAT
GCGCATTGCG GGCTCGGCTT GGCGATTGTC GATCGCCTGG TGCGTCATCT GGGCGGTGAT
CTCACCGTCG GGCCAACGGC CACGGACGCG CCATCGCCGG GTTTCCGGGT CACCATGCGG
TTTCCTGTCT CGACTGCGGC GGCTTGA
 
Protein sequence
MKFRARFDTL FGRLAVLIVV VLVLSHFSWL GVLRAERRER QFQASVDQMA FQLQAFQAAM 
DGHLHVKLPD LVTETDEPPS GDASSASDKS AELVRQLARR LPSDTQLRLE AGPTPRVFVR
FSQRNKWIAM PLVWVHAPPS ISAVVPGVMV VLAIAIAFSL FAAWQIQRPV RELADAAGAL
ARRRYVAPLK ERGPYELRQL TVQFNHMAAD LSAADEERNT MLAGIAHDLK TPLSRLRLRA
EMLADQKAGA GIERDVESMS AIVEQFLAYA QSGDSEAREV SVDRHLRGLV QPFAEQGKHV
ALDLHAGDRF RLKPTHLERI VVNLLDNAFA YGAEPVNVRT SADETGYTLT VEDHGAGIPV
ADFDRVMRPF VRLDPARGGN AHCGLGLAIV DRLVRHLGGD LTVGPTATDA PSPGFRVTMR
FPVSTAAA