| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4184 |
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| Symbol | |
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| ID | 6285612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | - |
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| Start bp | 461951 |
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| End bp | 463339 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642618669 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001892710 |
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| Protein GI | 187926365 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.267577 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGATC CCAAGGACCA GAAGCCCGGC CAATTTGACG ACGCAGGTCG CCGTACGCAT
GCTGGGAAAG AGACGCCCAA CGAGGTGTCT CCGACGCTGC TGCCGCCCCC GCGCGAGGGT
GGCAAGCGCC GCCGCTGGGG CATCTGGGTG GTGATCACTC TTCTGGTGCT GATCGGCTAC
GCGGTCTATC ACGCGAAGTA TCGCGACGCA GGCGGCCCGG GTGGGCGAGG AGGCGCTGGC
GGGCGCGGCG CAGCGATGGC CGGCAAGCCG ATGCCGGTGA TGGTCGGCAC GGCCATCAAG
GGCGACATCA ACGTGGTGCT GTCGGCGCTG GGCAATGTCA CGCCGGTCAA CAACGTGACG
GTCAAGACAC GTGTGGACGG CCAGCTCGTG CGCCTGGCAT TCACGGAGGG GCAGACCGTC
AAGGCCGGCG ACCTGCTCGC AGAGGTCGAC CCGCGCACCT ATCAGGCGCA GCTCGCCCAG
GCGGAAGGTC AGCTAGCGCG CGATCAGGCG CTGCTGCACA ACGCGAAGCT CGACTTGCAG
CGCTATCAGA CGCTGCTCTC GCAGGATTCA ATTTCCAAGC AGCAGGTGGA TACGCAAGCC
GCGCTGGTGC GTCAGTACGA CGGCACGGTC AAGCTGGACC AGGGCAATGT CGACAACGCG
CGCGTGCAGC TCTCCTACAC GCGCATCACC GCCCCGGTAT CTGGCCGGGT TGGCTTGCGC
CAGGTCGATC CGGGCAACAT CGTGCATGCG TCGGACACCA ACGGCATCGT GGTCATCACG
CAGATCGACC CGATCACGGT CATCTATTCC ATTCCCGAAG ACAACCTGCC CAAGGTCATG
CCGCGCCTGC AGTCCGGCGA CAAGCTGCCG GTGGAAGCGT GGGACCGCGG CCAGACCACG
CAGCTCGCGC GCGGCGTGCT CATGACGGTG GACAACACCA TCGACAACAC CACGGGCACC
GTCAAATTGC GTGCGCAGTT CCCGAACCAG AACGCGATGC TGTTCCCCAA TCAGTTCGTG
AACGTGCGCA TGCGGGTGGA TACGCTGCGC GACGTGGTGA TCGTGCCGGG TGCCGCCATC
CAGCGCGGCA CGCAGGGCAC CTTCGTCTAC GTGGTGGGCG ACAACAACAA GGTGGCGCTG
CGCCTGGTCA AGCTGGGCGT GACCGAAGGT GATCGTGTGT CGGTGGCGCA AGGCCTGCAG
CCGGGCGAGC GCGTGGTGAT CGACGGTGCC GACAAGCTGC GCGACGGCTC GCCGGTTGAG
GTGATCCAGC CGGGAGCCGC CGCCGCAAGC GCCCCCGCCG CCGGCCAGGC CGATCAGGGC
GGGCGTCATC GCCGTGGCCA GGGTGGTGCT TCAGCACCCG CCGCGAGTGC GCCGGCCGCC
AAACCGTAA
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| Protein sequence | MSDPKDQKPG QFDDAGRRTH AGKETPNEVS PTLLPPPREG GKRRRWGIWV VITLLVLIGY
AVYHAKYRDA GGPGGRGGAG GRGAAMAGKP MPVMVGTAIK GDINVVLSAL GNVTPVNNVT
VKTRVDGQLV RLAFTEGQTV KAGDLLAEVD PRTYQAQLAQ AEGQLARDQA LLHNAKLDLQ
RYQTLLSQDS ISKQQVDTQA ALVRQYDGTV KLDQGNVDNA RVQLSYTRIT APVSGRVGLR
QVDPGNIVHA SDTNGIVVIT QIDPITVIYS IPEDNLPKVM PRLQSGDKLP VEAWDRGQTT
QLARGVLMTV DNTIDNTTGT VKLRAQFPNQ NAMLFPNQFV NVRMRVDTLR DVVIVPGAAI
QRGTQGTFVY VVGDNNKVAL RLVKLGVTEG DRVSVAQGLQ PGERVVIDGA DKLRDGSPVE
VIQPGAAAAS APAAGQADQG GRHRRGQGGA SAPAASAPAA KP
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