Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4172 |
Symbol | |
ID | 6285596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | + |
Start bp | 443713 |
End bp | 445407 |
Gene Length | 1695 bp |
Protein Length | 564 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642618657 |
Product | phospholipase D/Transphosphatidylase |
Protein accession | YP_001892698 |
Protein GI | 187926353 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.900175 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGGGC ACCCGAGGAA CCACCCGACC GCGTCTCTGC GCGCCTGGTT CACCTGCTTG GCCATCGCGC TGCTGAGCGG CTGCGTCAGC CTGCCGGAGC ACGTGGATCG CCCTGTCACG ACGGCGCTGC CGAACGCCGA GTCGGCCACG TCGCTTGGGC GGCTTGCGCA GTCAAATGCG CCGTCGGCGG ATGTGTCGGG CTTCCGGCTG ATTCCGTCGG GCGAAGAAGC CTATGCCACA TTGCTCACAC TGGCCGACCG GGCAGAACGC ACGCTGGACT TGCAGTACTT CATCATTGAA AGCGACAACA GCGTGCGCGA GTTGATGCGT CATGTGTTGG CGGCTGCCGA GCGCGGCGTG CGTGTGCGCA TGCTGGTTGA CGACCTGCAT AGCGACGGGC GTGATCTCGC GTTCCTCAAG TTCTCGTCGC ACAAGAACAT CGATGTACGC CTGTTCAACC CGTTTCCGGG CGGGCGGATG TCGAATCTGA CACGGTATCT GAGCGGCGCG GCCGAGTTCC GCCGCGTCAA CCGGCGCATG CACAACAAGG CCTTCATTGC CGACAACGCG CTGGCCGTGA CAGGCGGGCG CAATCTGGGC GCCGAATATT TCACGCAAAA TCAGACCACC AACTTTGTGG ATCTCGACGT GCTGGCCGCG GGGCCGGCGG TGCGCCAGTT ATCGTCGGCA TTCGATGCGT ACTGGAACAG CGAATTCGCC TATCCGGTGC AGGCGCTGGC GCCCGAGCCG AGCACGGCGC ATCCACCCGA GCCGAAGGAC GGCAACTATC CGCCGCCGGT GACGATGCCG CATCGGCCGG AAGGGCCGCC GCAGCAGATC GACGTGCCGA CCCGGCCGGT CGACATGGGG TCCGGTTCTG CCAAGCCGGC ATCCGACCAG ACCGATCTCG CCAGCCCGGC GCCGGAGCAG CGCCTGCCGC TCAAGCCTGC CCCGCGCGAC TGGTTCCTGG CCGACCAGAT CGCCCGTGGC CGCCTGCGCC TGGAGTGGGC GCCCGCGCAG GTGATCGTCG ATCGTCCGGC CAAGGTGTCG GGTGATGACG TGGAACCTGG TGGCGAGCGC CTTGCCCAGA CGCTCCTGCG TCTGATTGAC GAGGCCGAGC GCGAGGTGGT GCTGATCTCG CCGTACTTCG TGCCCGGCAA GCGCGGCGTC GAGGTGGCCA AGCGCATGCA GGATCGCGGC GTGCGCCTGC GTGTGCTGAC CAACTCGCTG GCGGCGACCG ACGCACCCAT CGTGCATGTG GGCTATGCGA AATATCGTGG CGAGCTGGTC GACGACGGTG TTGAACTGTA CGAGCTGCGC CCGACCCTGG GCGATCGCCC GAAGATGATC GGCACTTTTC GTTCGTCGCA GGCGAGCCTG CATGTGAAAT CGATCGTGGT GGACCGCAGC ACGCTGTTTG TCGGCTCGAT GAACATCGAC CCGCGCTCTA TCGGACTGAA CACGGAAACC GGGTTGATCA TCCGCAGTCC GGTGCTGTCG GAGGCGGTAG CCCGGCTGTT TGACGACTCG GTGCGCGACA GTGCCTACCG GGTGACCAAG GATGATGGCC ACTTGCGCTG GACCACGCAC GAGAACGGCA AGGAGGTCGT CGTCGATCAC GAGCCGGAGG TGGGCCTGGG CCGCCGGACG TGGATCCAGA TGCTGGCGCC ATTGACTCCG GAAGAACTGC TGTAA
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Protein sequence | MQGHPRNHPT ASLRAWFTCL AIALLSGCVS LPEHVDRPVT TALPNAESAT SLGRLAQSNA PSADVSGFRL IPSGEEAYAT LLTLADRAER TLDLQYFIIE SDNSVRELMR HVLAAAERGV RVRMLVDDLH SDGRDLAFLK FSSHKNIDVR LFNPFPGGRM SNLTRYLSGA AEFRRVNRRM HNKAFIADNA LAVTGGRNLG AEYFTQNQTT NFVDLDVLAA GPAVRQLSSA FDAYWNSEFA YPVQALAPEP STAHPPEPKD GNYPPPVTMP HRPEGPPQQI DVPTRPVDMG SGSAKPASDQ TDLASPAPEQ RLPLKPAPRD WFLADQIARG RLRLEWAPAQ VIVDRPAKVS GDDVEPGGER LAQTLLRLID EAEREVVLIS PYFVPGKRGV EVAKRMQDRG VRLRVLTNSL AATDAPIVHV GYAKYRGELV DDGVELYELR PTLGDRPKMI GTFRSSQASL HVKSIVVDRS TLFVGSMNID PRSIGLNTET GLIIRSPVLS EAVARLFDDS VRDSAYRVTK DDGHLRWTTH ENGKEVVVDH EPEVGLGRRT WIQMLAPLTP EELL
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