Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4169 |
Symbol | |
ID | 6285591 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | + |
Start bp | 439315 |
End bp | 440682 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642618654 |
Product | MATE efflux family protein |
Protein accession | YP_001892695 |
Protein GI | 187926350 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family [TIGR01167] LPXTG-motif cell wall anchor domain |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGCGC CTGCTGCTCG CCCGTTGTGG CGAACATTCA TTGCATTCCT CGGCCCGCTG ATCCTGGCCA ACATCCTGCA ATCGTTGTCG GGCACGCTCA ACAACGTCTA TGTGGGCCAC ATGCTGGGCG TGAAGGCGCT GGCTGCGGTG TCAGCGTTCT TCCCGATCCT GTTCTTCTTC ATCGCCTTCA TCATCGGGCT GGGGTCGGGA GCGGCGGTGT TGATCGGGCA GGCGTGGGGC GCCAAGAAGC CCGAGGCGGT CAAGACCGTT GCGGGCACCA CGCTCTCCGT GGGTTTCATC GTGGGCCTGG CGGTGGCGCT GCTGGGAGGC CCGTTCGCAA ACGCGCTGCT GGGTTGGCTC GGCACGCCGG CCGATATCCT GCAGGACGCC ACGCTCTACG CCAGCGTCAT GCTCTATGCC ATGCCGGGCC TGTTCGTCTA CCTGCTTGCC ACGGCGATGA TGCGCGGCGT GGGCGATACG CGCACGCCGC TGCGCACCCT CGCGCTGTCG ACGTCGATCG GGCTGGTGCT GACGCCGACC TTCATTCGCG GCTGGTTCGG CCTGCCGCAA CTGGGCGTGG CAAGCGGCGC CGCGGCGACC ATCATTTCGT TCACGATCGC GCTGGTGTGG CTCGCATTCT TCCTGCGCCG CCGCAACCAT CCGCTCGCGC CCGATGCCGT GCTGGCCCGG CACTTGTGGG TCGATTTTGG TGTGCTCAAG ACCGTGCTGA AGATCGGTGT GCCGACGGGC TTGCAGCTTG TGGTCATCTC GATTGCCGAG CTGGCGCTGC TGTCATTCGT CAACGGCTTC GGCTCCGACG CGACGGCCGC CTACGGCGCC GGCACGCAGA TCATCAGCTA CGTGCAGTTT CCCGCCATGT CGATTGCGAT CACGGCGTCC ATCCTCGGTG CGCAAGCCAT CGGCTCGGGC AATACGGAGC GGCTCGATGC CATCACGCGC ACCGGGCTGT GGCTCAACGT TGCGATTACC GGTGTGCTGG TGCTGATGGC GTTGCTGTTT TCGCGCGCGG TCATCGGCTG GTTCACCACC AGCGCAGAAG TGATGAGCCT TGCCCAGAGC CTGCTGCATA TCTCGCTGTG GAGTTCGGTC ATCTTTGGCA TGGCGAGCGT CTTCTCGGGC GTGATGCGCT CAAGCGGCAC GGTGATGGCG CCCACGGCCA TTTCCATCCT CGCCATCGCG GCGGTGGAAG TGCCGGTGGC CTGGGTGCTG AGCCGGCATA TCGGCACCGA CGGCATCTGG GCTGCATATC CGGCCGCCTT CCTTGCCATG TTCGTGATGC AGGGGCTGTA CTACGCGCTC GTGTGGCGCC GCCGCGCGCA GCGGTTCGGT ATCCGCCGCA TGGTTTGA
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Protein sequence | MTAPAARPLW RTFIAFLGPL ILANILQSLS GTLNNVYVGH MLGVKALAAV SAFFPILFFF IAFIIGLGSG AAVLIGQAWG AKKPEAVKTV AGTTLSVGFI VGLAVALLGG PFANALLGWL GTPADILQDA TLYASVMLYA MPGLFVYLLA TAMMRGVGDT RTPLRTLALS TSIGLVLTPT FIRGWFGLPQ LGVASGAAAT IISFTIALVW LAFFLRRRNH PLAPDAVLAR HLWVDFGVLK TVLKIGVPTG LQLVVISIAE LALLSFVNGF GSDATAAYGA GTQIISYVQF PAMSIAITAS ILGAQAIGSG NTERLDAITR TGLWLNVAIT GVLVLMALLF SRAVIGWFTT SAEVMSLAQS LLHISLWSSV IFGMASVFSG VMRSSGTVMA PTAISILAIA AVEVPVAWVL SRHIGTDGIW AAYPAAFLAM FVMQGLYYAL VWRRRAQRFG IRRMV
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