Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4167 |
Symbol | |
ID | 6285588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | + |
Start bp | 435846 |
End bp | 438593 |
Gene Length | 2748 bp |
Protein Length | 915 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642618652 |
Product | Nitrate reductase |
Protein accession | YP_001892693 |
Protein GI | 187926348 |
COG category | [C] Energy production and conversion |
COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACCA TCCCCATTCA CCCAGTAACG GACGCCGTGC GCACCACCTG CCCATACTGC GGCGTCGGCT GCGGCGTGCT CGCGACCCCG CAAGCGGATG GCAGTGTCAG CATTCAAGGC GATCCGACGC ACCCAGCCAA CGCAGGGCGC CTGTGCGTAA AGGGCTCCGC GCTGGGCGAG ACCGTGAGCC TGGACGGCCG GTTGCTTTAC CCGGCCATGC GCGAGCGCTC GCGTGACGTG GACGCTCCGG AGTTCACCAA GCCGGCGCCA TTACAGCGCG TCTCGTGGGA CACCGCGCTC GACGCCGTCG CGCAAGGCTT TCGCCGCATC GCCGAAGAGC ACGGTCCGGA TTCCGTCGCG CTCTACGTTT CCGGCCAGTT GCTGACCGAG GACTACTACG TCGCCAACAA GCTGATGAAG GGCTTCATCG GCACCGCCAA CATCGATACG AACTCTCGAC TATGCATGTC GTCGGCCGTG GCGGGGCATA AGCGCGCGTT TGGCGAAGAC CTCGTGCCCG TCTGCTATGA CGATCTGGAA ACGGCGGACC TCATCGTGCT GGTGGGCTCG AACACGGCGT GGTGTCACCC GATCCTGTTC CAGCGCATCA TGCGCGCCAA GGAAGCGCGG CCCGAGATGA AAGTGGTGGT GGTTGACCCG CGCCACACGG CCACCTGCGA GCTGGCCGAT CTGCATCTGC CCATCAAGCC CGGCACCGAT GTGTCGCTGT TCAACGGCCT GCTGTCGTTT CTCTCGCGGC GCGGCGTGGT CGACAGGAAC TTCGTCACGC TGCACACCAA CGGCCCGGAC GCCGCGCTGG AAGCTGCCGG CACCGAGAGC GACGACGTCG AAGCCGTCGC CAAGGCCTGC AAGCTCAAGC TCGACGATCT GCTCACCTTC TACAGCTGGT TTGCCGATAC CGAGCGCACC ATCACCGCCT TCTCGATGGG CGTCAATCAG TCGACGGCGG GCACGGACAA GGTCAACAGC ATCATCAACT GCCACTTGCT CACCGGCCGC ATCGGCCGCG CGGGCATGGG GCCGTTTTCG ATTACCGGAC AGCCGAATGC GATGGGTGGC CGCGAAGTGG GCGGTCTGGC CAACATGCTG GCCGCGCATA TGGAGCTGAA TGATCCGTCG CATCGCGACC TCGTGCAGAC GTTCTGGGCG TCGCCGCGCA TGGCCGACAA GATGGGCCTC AAGGCGGTCG ACCTGTTCAA GGCCATTGAA GACGGGCGCG TCAAGGCCGT GTGGATCATG GGCACCAACC CCGTGGTCAG CCTGCCCGAT GCGGACCAGG CGCGCCGCGC CCTGGCCAAG TGCGAACTCG TCGTCGCTTC CGACATCGTT GAAGCCACCG ACACCACCGT GCTGGCCGAC ATCCTGCTGC CCGCGCTCGG CTGGGGCGAG AAAGACGGCA CGGTGACGAA CTCCGAGCGC CGCATCTCGC GCCAGCGCGC CTTTCTGCAG GCCCCCGGCG AGGCACGTGC GGACTGGGAC ATCATCGCCG ACGTTGCACG CCGCATGGGT TACGACGGCT TTGACTTCAA GAGCCCGCGC GATGTGTTCG ACGAGCACGC GCGCCTGTCC GCTTACGCCA ACGATGCGAG CGGCGTCCGC CGCGCCTTCC ACCTCGGCGG CCTGGCCGGG CTCGACGCCG GGGCATACGA CGGCATGTCG CCGGTGCAAT GGCCCGTCGC AACGTCGGGC AACGGCGAAG CGCGGCTCTT CAGCGATGGC CGCTTCGCCC ACGCCGATGG TCGCGCGCGT TTCGTGCCGA CGCCTGCCCG TGCGCCCGCG CATGCGGCAG ATGGTGAATA TCCGCTCATT CTCAACACCG GCCGCGTGCG CGACCAATGG CACACCATGA CGCGCACCGG CCGCGCGCCC AGGCTGGCCG ATCACGTGCC CGAACCGTTC GTCGATCTGC ACCCGCACGA TGCGCTGCTG GCCGGCGTGC GCGAAGGCGG CCTGGCGCGC GTGTCGTCGC GCTGGGGCAG TGTGGTGGCG CGTGTGCGCA TGACGGGCGG TATCGCGCGC GGCAGCGTGT TCGTACCGAT CCACTGGAAC GGCCAGTTTG CTTCCGATGC GCGCGTGGGT GCGGTCGTCA ATCCGGTGGT CGACCCGGTG TCCGGCGAGC CGGAGTTCAA GCACACGCCG GTGATGGTCG AGCCGTTTGA TGTGGCGTGG CACGGTTTTG TGCTCTCGCG GCGCGCACTG GACACCGACG ATGCAACCTG GTGGACGCGG ATTCAGGGCA AGCAGTTCCT GCGCTATGAG CTGGCCGGCC GCCAGCACCT TGGCTCCGTA CACGATTGGG CGCGCACGCT GCTCGGCGTG ACTGACCCGC ACGCCGACTG GCTCGAATAC GAAGACGCGA CCGCGCGTGT CTACCGCGCC GTGCACGTGG TGGACGATCG CATCGAAGCC TGCGTGTTTC TCTCACCGCG CCCGGATCTG CCGTCGCGCA ACTGGCTGGC TGGCCTGTTC GCACAAGAGC GCCTGGAAGA CCTCGATCGT GCGGGCGTGC TGCTTGGCCA GCCGATCGAA GCCGGCGTCG ACGTGGGGCC AACCGTTTGC TCGTGCTTTG GCGTGGGCCG TAACACCATC TGCGATGCCA TCCGCACCAA GGGCCTGCAA TCCACCGGCG AGATCACGGC CTGCCTGAAG GCGGGCGGCA ATTGCGGCTC GTGCGTGCCG GAACTCAAGC GGTTGCTGGT GGAGGCGCGC GTTCAGCAGG CGGCATGA
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Protein sequence | MTTIPIHPVT DAVRTTCPYC GVGCGVLATP QADGSVSIQG DPTHPANAGR LCVKGSALGE TVSLDGRLLY PAMRERSRDV DAPEFTKPAP LQRVSWDTAL DAVAQGFRRI AEEHGPDSVA LYVSGQLLTE DYYVANKLMK GFIGTANIDT NSRLCMSSAV AGHKRAFGED LVPVCYDDLE TADLIVLVGS NTAWCHPILF QRIMRAKEAR PEMKVVVVDP RHTATCELAD LHLPIKPGTD VSLFNGLLSF LSRRGVVDRN FVTLHTNGPD AALEAAGTES DDVEAVAKAC KLKLDDLLTF YSWFADTERT ITAFSMGVNQ STAGTDKVNS IINCHLLTGR IGRAGMGPFS ITGQPNAMGG REVGGLANML AAHMELNDPS HRDLVQTFWA SPRMADKMGL KAVDLFKAIE DGRVKAVWIM GTNPVVSLPD ADQARRALAK CELVVASDIV EATDTTVLAD ILLPALGWGE KDGTVTNSER RISRQRAFLQ APGEARADWD IIADVARRMG YDGFDFKSPR DVFDEHARLS AYANDASGVR RAFHLGGLAG LDAGAYDGMS PVQWPVATSG NGEARLFSDG RFAHADGRAR FVPTPARAPA HAADGEYPLI LNTGRVRDQW HTMTRTGRAP RLADHVPEPF VDLHPHDALL AGVREGGLAR VSSRWGSVVA RVRMTGGIAR GSVFVPIHWN GQFASDARVG AVVNPVVDPV SGEPEFKHTP VMVEPFDVAW HGFVLSRRAL DTDDATWWTR IQGKQFLRYE LAGRQHLGSV HDWARTLLGV TDPHADWLEY EDATARVYRA VHVVDDRIEA CVFLSPRPDL PSRNWLAGLF AQERLEDLDR AGVLLGQPIE AGVDVGPTVC SCFGVGRNTI CDAIRTKGLQ STGEITACLK AGGNCGSCVP ELKRLLVEAR VQQAA
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