Gene Rpic_4167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4167 
Symbol 
ID6285588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp435846 
End bp438593 
Gene Length2748 bp 
Protein Length915 aa 
Translation table11 
GC content67% 
IMG OID642618652 
ProductNitrate reductase 
Protein accessionYP_001892693 
Protein GI187926348 
COG category[C] Energy production and conversion 
COG ID[COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCA TCCCCATTCA CCCAGTAACG GACGCCGTGC GCACCACCTG CCCATACTGC 
GGCGTCGGCT GCGGCGTGCT CGCGACCCCG CAAGCGGATG GCAGTGTCAG CATTCAAGGC
GATCCGACGC ACCCAGCCAA CGCAGGGCGC CTGTGCGTAA AGGGCTCCGC GCTGGGCGAG
ACCGTGAGCC TGGACGGCCG GTTGCTTTAC CCGGCCATGC GCGAGCGCTC GCGTGACGTG
GACGCTCCGG AGTTCACCAA GCCGGCGCCA TTACAGCGCG TCTCGTGGGA CACCGCGCTC
GACGCCGTCG CGCAAGGCTT TCGCCGCATC GCCGAAGAGC ACGGTCCGGA TTCCGTCGCG
CTCTACGTTT CCGGCCAGTT GCTGACCGAG GACTACTACG TCGCCAACAA GCTGATGAAG
GGCTTCATCG GCACCGCCAA CATCGATACG AACTCTCGAC TATGCATGTC GTCGGCCGTG
GCGGGGCATA AGCGCGCGTT TGGCGAAGAC CTCGTGCCCG TCTGCTATGA CGATCTGGAA
ACGGCGGACC TCATCGTGCT GGTGGGCTCG AACACGGCGT GGTGTCACCC GATCCTGTTC
CAGCGCATCA TGCGCGCCAA GGAAGCGCGG CCCGAGATGA AAGTGGTGGT GGTTGACCCG
CGCCACACGG CCACCTGCGA GCTGGCCGAT CTGCATCTGC CCATCAAGCC CGGCACCGAT
GTGTCGCTGT TCAACGGCCT GCTGTCGTTT CTCTCGCGGC GCGGCGTGGT CGACAGGAAC
TTCGTCACGC TGCACACCAA CGGCCCGGAC GCCGCGCTGG AAGCTGCCGG CACCGAGAGC
GACGACGTCG AAGCCGTCGC CAAGGCCTGC AAGCTCAAGC TCGACGATCT GCTCACCTTC
TACAGCTGGT TTGCCGATAC CGAGCGCACC ATCACCGCCT TCTCGATGGG CGTCAATCAG
TCGACGGCGG GCACGGACAA GGTCAACAGC ATCATCAACT GCCACTTGCT CACCGGCCGC
ATCGGCCGCG CGGGCATGGG GCCGTTTTCG ATTACCGGAC AGCCGAATGC GATGGGTGGC
CGCGAAGTGG GCGGTCTGGC CAACATGCTG GCCGCGCATA TGGAGCTGAA TGATCCGTCG
CATCGCGACC TCGTGCAGAC GTTCTGGGCG TCGCCGCGCA TGGCCGACAA GATGGGCCTC
AAGGCGGTCG ACCTGTTCAA GGCCATTGAA GACGGGCGCG TCAAGGCCGT GTGGATCATG
GGCACCAACC CCGTGGTCAG CCTGCCCGAT GCGGACCAGG CGCGCCGCGC CCTGGCCAAG
TGCGAACTCG TCGTCGCTTC CGACATCGTT GAAGCCACCG ACACCACCGT GCTGGCCGAC
ATCCTGCTGC CCGCGCTCGG CTGGGGCGAG AAAGACGGCA CGGTGACGAA CTCCGAGCGC
CGCATCTCGC GCCAGCGCGC CTTTCTGCAG GCCCCCGGCG AGGCACGTGC GGACTGGGAC
ATCATCGCCG ACGTTGCACG CCGCATGGGT TACGACGGCT TTGACTTCAA GAGCCCGCGC
GATGTGTTCG ACGAGCACGC GCGCCTGTCC GCTTACGCCA ACGATGCGAG CGGCGTCCGC
CGCGCCTTCC ACCTCGGCGG CCTGGCCGGG CTCGACGCCG GGGCATACGA CGGCATGTCG
CCGGTGCAAT GGCCCGTCGC AACGTCGGGC AACGGCGAAG CGCGGCTCTT CAGCGATGGC
CGCTTCGCCC ACGCCGATGG TCGCGCGCGT TTCGTGCCGA CGCCTGCCCG TGCGCCCGCG
CATGCGGCAG ATGGTGAATA TCCGCTCATT CTCAACACCG GCCGCGTGCG CGACCAATGG
CACACCATGA CGCGCACCGG CCGCGCGCCC AGGCTGGCCG ATCACGTGCC CGAACCGTTC
GTCGATCTGC ACCCGCACGA TGCGCTGCTG GCCGGCGTGC GCGAAGGCGG CCTGGCGCGC
GTGTCGTCGC GCTGGGGCAG TGTGGTGGCG CGTGTGCGCA TGACGGGCGG TATCGCGCGC
GGCAGCGTGT TCGTACCGAT CCACTGGAAC GGCCAGTTTG CTTCCGATGC GCGCGTGGGT
GCGGTCGTCA ATCCGGTGGT CGACCCGGTG TCCGGCGAGC CGGAGTTCAA GCACACGCCG
GTGATGGTCG AGCCGTTTGA TGTGGCGTGG CACGGTTTTG TGCTCTCGCG GCGCGCACTG
GACACCGACG ATGCAACCTG GTGGACGCGG ATTCAGGGCA AGCAGTTCCT GCGCTATGAG
CTGGCCGGCC GCCAGCACCT TGGCTCCGTA CACGATTGGG CGCGCACGCT GCTCGGCGTG
ACTGACCCGC ACGCCGACTG GCTCGAATAC GAAGACGCGA CCGCGCGTGT CTACCGCGCC
GTGCACGTGG TGGACGATCG CATCGAAGCC TGCGTGTTTC TCTCACCGCG CCCGGATCTG
CCGTCGCGCA ACTGGCTGGC TGGCCTGTTC GCACAAGAGC GCCTGGAAGA CCTCGATCGT
GCGGGCGTGC TGCTTGGCCA GCCGATCGAA GCCGGCGTCG ACGTGGGGCC AACCGTTTGC
TCGTGCTTTG GCGTGGGCCG TAACACCATC TGCGATGCCA TCCGCACCAA GGGCCTGCAA
TCCACCGGCG AGATCACGGC CTGCCTGAAG GCGGGCGGCA ATTGCGGCTC GTGCGTGCCG
GAACTCAAGC GGTTGCTGGT GGAGGCGCGC GTTCAGCAGG CGGCATGA
 
Protein sequence
MTTIPIHPVT DAVRTTCPYC GVGCGVLATP QADGSVSIQG DPTHPANAGR LCVKGSALGE 
TVSLDGRLLY PAMRERSRDV DAPEFTKPAP LQRVSWDTAL DAVAQGFRRI AEEHGPDSVA
LYVSGQLLTE DYYVANKLMK GFIGTANIDT NSRLCMSSAV AGHKRAFGED LVPVCYDDLE
TADLIVLVGS NTAWCHPILF QRIMRAKEAR PEMKVVVVDP RHTATCELAD LHLPIKPGTD
VSLFNGLLSF LSRRGVVDRN FVTLHTNGPD AALEAAGTES DDVEAVAKAC KLKLDDLLTF
YSWFADTERT ITAFSMGVNQ STAGTDKVNS IINCHLLTGR IGRAGMGPFS ITGQPNAMGG
REVGGLANML AAHMELNDPS HRDLVQTFWA SPRMADKMGL KAVDLFKAIE DGRVKAVWIM
GTNPVVSLPD ADQARRALAK CELVVASDIV EATDTTVLAD ILLPALGWGE KDGTVTNSER
RISRQRAFLQ APGEARADWD IIADVARRMG YDGFDFKSPR DVFDEHARLS AYANDASGVR
RAFHLGGLAG LDAGAYDGMS PVQWPVATSG NGEARLFSDG RFAHADGRAR FVPTPARAPA
HAADGEYPLI LNTGRVRDQW HTMTRTGRAP RLADHVPEPF VDLHPHDALL AGVREGGLAR
VSSRWGSVVA RVRMTGGIAR GSVFVPIHWN GQFASDARVG AVVNPVVDPV SGEPEFKHTP
VMVEPFDVAW HGFVLSRRAL DTDDATWWTR IQGKQFLRYE LAGRQHLGSV HDWARTLLGV
TDPHADWLEY EDATARVYRA VHVVDDRIEA CVFLSPRPDL PSRNWLAGLF AQERLEDLDR
AGVLLGQPIE AGVDVGPTVC SCFGVGRNTI CDAIRTKGLQ STGEITACLK AGGNCGSCVP
ELKRLLVEAR VQQAA