Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4164 |
Symbol | |
ID | 6285579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | + |
Start bp | 431354 |
End bp | 433909 |
Gene Length | 2556 bp |
Protein Length | 851 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642618649 |
Product | nitrite reductase (NAD(P)H), large subunit |
Protein accession | YP_001892690 |
Protein GI | 187926345 |
COG category | [C] Energy production and conversion |
COG ID | [COG1251] NAD(P)H-nitrite reductase |
TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATGA AGATCGTCGT CATTGGCCAC GGAATGGTGG GCCACAAGTT TCTGGAAAGC CTGCTGCATG CTCCGGGCCA TCACCTCCAG GTGACGGTGC TGTGCGAAGA GCCGCGCCCC GCCTACGACC GCGTGCACCT GTCGGAATTC TTCACGGGCA AGACGGCGGA AGAGCTCTCG CTCGTGGCGC CGGGCTTCTT TGACCGCGAC GACGTGGTGC TCAAGCTCAA CGCCCGCGCC ACGGCCATCG ACATCACCGC CAAAACGGTG ACGGCCTCGA CCGGCGAGGT GCTGCCGTAC GACAAGCTTG TCCTCGCTTC GGGCTCGTCG CCGTTCGTGC CGCCCGTACC GGGCCGCGAC CGCAAGGACT GCTTCGTCTA TCGCACCATC GAAGACCTCG AAGCGATGGC CGAATGCGGC CAGCGCGCCA AGACCGGCGT CGTGATCGGC GGCGGGCTGC TGGGGCTGGA ATGCGCCAAG GCGCTGCGCG ACATGAACCT GCAAACGCAT GTGGTCGAGT TTGCCGGTCG CCTGATGGCG ATGCAGGTGG ATGACGGCGG CGGCCGCATG CTGCGCCGGA AGATCGAAGA CCTCGGCGTG ACCGTCCACA CGCAGAAGAA CACGTCGGAG ATCGTTGATG GCGAAACCGC GACGCACCGC CTGAACTTTG CCGACGGCAC GCACCTGGAA GCGGACATGG TCGTCTTCTC GGCCGGCATC CGCCCGCGCG ACGAACTGGC GCGCGCTTGC GGGCTGGAAG TGGGCGAGCG CGGCGGCATC GTGATCGACT CCGAATGCCG TACCTCGGCG CCGGACGTCT ACGCGATTGG CGAATGCGCG CTGTGGGGCG GCAAAATCTA CGGCCTGGTT GCGCCCGGCT ACGAGATGGC GCGCATCACC GCCAAGCAGA TCCTGGCCGC CGACGATGCG TCGGAGTTCA GCGGCGCCGA CATGAGCACC AAGCTCAAGC TGATGGGCGT GGATGTCGCC AGCCTGGGCG ATGCGCAGGG CGTGACGCCG GGCAGCCGCA GCGTGCAGTT CACCGACGAG CGCAAGCAGA TCTACAAGAA GCTGGTGGTG TCGGAAGACG GCAAGTACCT GCTGGGCGGC GTGCTGGTGG GCGATGCGGC GGAATACGGC ACGCTGCTGC AGATGATGCT CAACCGCATC GAGCTGCCCG AGGCGCCGGA ATTCCTGATC CTGCCGCAGG CCGATGGCAA TGCGCGCCCC GCATTGGGCG TGGATGCGCT GCCCGATAGC GCGCAGATCT GTTCGTGCAA CGACGTATCG AAAGGCGCGC TGTGCCAGGC GGTGTGCGCC GGCGCCACCA CCGTGGGCGC GCTCAAGGAT GCCACCAAGG CCGGCACCTC GTGTGGCGGA TGTGTGCCGC TCATGACGCA GGTGATGAAA GCCGAGATGA AGAAGCAAGG CCTGGCCGTC AACAACCACA TCTGCGAGCA CTTTCCGTAT TCGCGTCAGG AGCTGTATCA CCTGGTGCGC GTGGGCCGCA TCCAGTCGTT CGAGGCGCTG CTGGAAGCGC ATGGCAGCGG CATGGGCTGC GACATTTGCA AGCCCGCCGT CGCGAGCATC CTTGCTTCGT GCTGGAACGA CTTCGTCCTC AAGAAAGAGC ACGCCAGCCT GCAGGATTCC AACGACTACT TTCTCGCCAA CATCCAGAAG GACGGGACGT ACTCCGTGGT GCCGCGCATG CCCGGCGGCG AGGTGACGGC AGACGGCCTG ATCGCCGTGG GCCAGGTCGC CAAGAAATAC GACCTGTACA CCAAGATCAC GGGCGGCCAG CGTGTCGATC TGTTCGGGGC GCGGCTGGAG CAGTTGCCGC TGATCTGGGA AGAGCTGATC GCGGCCGGCT TCGAGTCGGG TCACGCGTAC GGCAAATCGC TGCGCACGGT GAAGTCGTGC GTGGGCTCGA CGTGGTGCCG CTATGGCGTG GGCGATTCAG TGGGTTTTGC GATTGCGCTG GAGAACCGCT ACAAGGGCCT GCGCTCGCCG CACAAGATCA AGTTTGGCGT CTCCGGCTGC ACGCGGGAAT GCGCCGAAGC GCAGGGCAAG GACGTCGGCA TCATCGCCAC CGAGAAAGGC TGGAACCTGT ATGTGTGCGG CAACGGCGGC ATGAAACCCC GCCATGCCGA ACTGCTGGCG GCCGACCTCG ATCAGGAAAC GCTCATCAAG TATGTCGACC GCTTCCTGAT GTTCTACGTG CGCACGGCCG ACCGCCTGCA ACGCACCAGC ACATGGCGCG ACAACCTCGA AGGCGGTCTC GACTATCTGA AGGATGTGGT GATCAACGAC AAGCTGGGCA TCGTGGCCGA ACTCGAAGCC GAGATGCAGC ACGTGGTCGA TACCTACCAG GACGAATGGA AGACGGCCGT GACGAACCCT GACGTGCGCA AGCGCTTCCG CCACTTCGTC AACAGCGAAG CCAAGGATGC GAATGTCGTC TTCGTCGAGG AGCGTGGCCA GATCCGCCCT GCCACGGTCG AGGAGCGTGC CAAGACGCGG CCCGTGCGCA TTCCTGTTGT TGCTGAGGCC GCTTGA
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Protein sequence | MTMKIVVIGH GMVGHKFLES LLHAPGHHLQ VTVLCEEPRP AYDRVHLSEF FTGKTAEELS LVAPGFFDRD DVVLKLNARA TAIDITAKTV TASTGEVLPY DKLVLASGSS PFVPPVPGRD RKDCFVYRTI EDLEAMAECG QRAKTGVVIG GGLLGLECAK ALRDMNLQTH VVEFAGRLMA MQVDDGGGRM LRRKIEDLGV TVHTQKNTSE IVDGETATHR LNFADGTHLE ADMVVFSAGI RPRDELARAC GLEVGERGGI VIDSECRTSA PDVYAIGECA LWGGKIYGLV APGYEMARIT AKQILAADDA SEFSGADMST KLKLMGVDVA SLGDAQGVTP GSRSVQFTDE RKQIYKKLVV SEDGKYLLGG VLVGDAAEYG TLLQMMLNRI ELPEAPEFLI LPQADGNARP ALGVDALPDS AQICSCNDVS KGALCQAVCA GATTVGALKD ATKAGTSCGG CVPLMTQVMK AEMKKQGLAV NNHICEHFPY SRQELYHLVR VGRIQSFEAL LEAHGSGMGC DICKPAVASI LASCWNDFVL KKEHASLQDS NDYFLANIQK DGTYSVVPRM PGGEVTADGL IAVGQVAKKY DLYTKITGGQ RVDLFGARLE QLPLIWEELI AAGFESGHAY GKSLRTVKSC VGSTWCRYGV GDSVGFAIAL ENRYKGLRSP HKIKFGVSGC TRECAEAQGK DVGIIATEKG WNLYVCGNGG MKPRHAELLA ADLDQETLIK YVDRFLMFYV RTADRLQRTS TWRDNLEGGL DYLKDVVIND KLGIVAELEA EMQHVVDTYQ DEWKTAVTNP DVRKRFRHFV NSEAKDANVV FVEERGQIRP ATVEERAKTR PVRIPVVAEA A
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