| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4163 |
|---|
| Symbol | |
|---|
| ID | 6285578 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010678 |
|---|
| Strand | + |
|---|
| Start bp | 430017 |
|---|
| End bp | 431339 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642618648 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_001892689 |
|---|
| Protein GI | 187926344 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2223] Nitrate/nitrite transporter |
|---|
| TIGRFAM ID | [TIGR00886] nitrite extrusion protein (nitrite facilitator) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGCA AAGCCACCCG AATCGACCTG TTCAGCCTGC GTACGCCGCA GATGCGCGCC
TTCCATCTGA CGTGGCTCGC GTTCTTCGTG TGTTTCTACG CGTGGTTCGC CTGCGCGCCG
CTCATGCCGG TGCTCAAGGG CGAGTTCCAC CTCACGCCGG GGCAGATCGC CAACATCAAC
ATCGCGGCGG TGGCGGTGAC GATCCTGGTG CGGCTGATCG TCGGCCCGCT GTGCGACCGC
TTCGGCCCGC GCAAGACCTA TACCGGTTTG CTGCTGCTGG GGGCCATCCC CGTGCTGGGC
GTGGCACTTG CGCAAAGCTA CGAGACCTTC CTGTTCTTCC GCCTGGCGAT CGGCGCGATT
GGCGCGAGCT TCGTCATCAC GCAGTACCAC ACGTCGGTCA TGTTCGCGCC AAACGTGGTG
GGCACCGCCA ACGCGGCGGC GGCCGGCTGG GGCAACGCAG GCGGCGGTGT GGCGCAAGGC
ACGATGCCGC TGCTGCTGAC CGCCATCGTG ATGATGGGCG TGACGCAGAG CATGGGCTGG
CGCCTGGCCA TGGTGGTGCC GGGCGTGGCG ATGCTGCTCG TCGCGGCGCT GTACTGGCGC
TATACGCAGG ACTGCCCGGA AGGCAACTTC AGCGCACTGC GCGCCGCCGG CAAGACCATC
GAAGGCGGCA AGAAGGGCGG CTGGGGCAGC TTTGTGGCCG CCGCCGGCAA CTACCGGGTG
TGGCTGCTGT TCATTACCTA CGGCGCGTGC TTTGGCGTGG AGATCTTCAT CCATAACATC
GCCGCCACCT ACTACGTCGA TCACTTCGGC CTGTCGCTCT CGGCTGCCGG CATGGCCGCG
GCCAGCTTCG GCCTGCTGGC GCTGTTTGCC CGCGCGCTGG GCGGCATCGT GTCGGACCGC
GTGGCCGCCA AGCGTGGCCT GGATGCGCGC ACCCAACTGC TGTGCGTGCT GATGATGGGC
GAGGGCCTGG GCCTGTTCGG CTTTGCCCAT GCAGGCAGCG TGCCGGTGGC CATTCTTGCG
ATGCTGGGCT TCGGCCTGTT CACGCATATG GCATGCGGTG CCACGTATGC GCTGGTGCCG
TTCATTGACC GCCGTGCGCT CGGCGGTGTG GCCGGCATCA TCGGTGCGGG CGGCAACGCC
GGCGCGGTGG CGGCGGGCTT CCTGCTCAAG GGCATGGCCG ATACGCAGGC CACGCTGTCC
ATCCTCGGCG TGCTGGTGGC GCTGTCAGCT ATCTGCGCCA TTGCCGTGCG TTTCTCGGCA
GAACACAAGG CACGCGAACA AGCGCTGTAC GACAACACGC TGGCCGCCGC CGGCAACGCC
TGA
|
|---|
| Protein sequence | MTGKATRIDL FSLRTPQMRA FHLTWLAFFV CFYAWFACAP LMPVLKGEFH LTPGQIANIN
IAAVAVTILV RLIVGPLCDR FGPRKTYTGL LLLGAIPVLG VALAQSYETF LFFRLAIGAI
GASFVITQYH TSVMFAPNVV GTANAAAAGW GNAGGGVAQG TMPLLLTAIV MMGVTQSMGW
RLAMVVPGVA MLLVAALYWR YTQDCPEGNF SALRAAGKTI EGGKKGGWGS FVAAAGNYRV
WLLFITYGAC FGVEIFIHNI AATYYVDHFG LSLSAAGMAA ASFGLLALFA RALGGIVSDR
VAAKRGLDAR TQLLCVLMMG EGLGLFGFAH AGSVPVAILA MLGFGLFTHM ACGATYALVP
FIDRRALGGV AGIIGAGGNA GAVAAGFLLK GMADTQATLS ILGVLVALSA ICAIAVRFSA
EHKAREQALY DNTLAAAGNA
|
|---|
| |