Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4153 |
Symbol | |
ID | 6285567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | + |
Start bp | 420400 |
End bp | 421347 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642618638 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_001892679 |
Protein GI | 187926334 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGACC TGAACGACCT CGTCCTGTTT GCCAGCGTGG TGACGCACGG CAGTTTTTCC GGCGCCGCCA GGGCGCTGGG GATTCCGAAA TCGCGCGTGA GCCGCCGCGT GGCGGATCTG GAAACACGTC TGGGGGTGCG GCTCCTGCAG CGCTCAACGC GTGCCGTGCA TGTCACGGAC GTGGGCTCGG CGTTCTTTAC GCATTGCGAA TCGATGACCC AGGCCGCCCG CGCTGCCTTC GAGGTGGCCG AGCACGCCGG CGAAAAACCT TCCGGCCGCC TGCGCGTGAG CTGTCCGGTG GGCGTGGCGC ATGTGTTCAT CGCGCCCGTG CTGTCGAAAT TCCTGCGCGC GCAGCCCGAT GTGCGCCTTG AGCTGGACGT GACAAACCGC CGTGTCGACG TGATCGGCGA CGGCTACGAC GTGGCGCTGC GCGTGCGCTC GACGCTGGAC GATTCCAACC TCGTCGTGCG CAGCTTTGGC GTGAGCGACC AGGTGCTGGT GGCCAGCCCG TCGTTTGTCG CCGAGCATGG GCCCTTCGAG ACGCCGGAGT CGATGCGCGG CGTGATGGGC GTGGGCGTCG ACGGCGCGGC CGGTGAGCGG ACGCGCTGGC GCCTGACCGC TCCCGAAGGC GGTGCGGTCG ATATCGAATA CACCCCCGCG CTGGTGACGG ACGACCTGTA TCTGATGGGG CAGACGGCGC TGGCCGGCAT TGGCGTTGCG CAACTGCCGT TCAACCTCTG CGCGGAGCCG GTTCGTGATG GCCGGCTTGT CGTGCTGTTG CCGGAATACC GCTTGCCGGT GCACCAGTTT CACGCGGTGT TTCCGTCACG CCGGGGCTTG GTGCCGGCGG TGCGTGTGTT TATCGAATTC CTGGCAGAAG AGTTGCCCGG CATGACGGCA AATGTCAGTC GCTGCTATGA GGACATCGTT CGGCAGCCCG ATCGTTGA
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Protein sequence | MEDLNDLVLF ASVVTHGSFS GAARALGIPK SRVSRRVADL ETRLGVRLLQ RSTRAVHVTD VGSAFFTHCE SMTQAARAAF EVAEHAGEKP SGRLRVSCPV GVAHVFIAPV LSKFLRAQPD VRLELDVTNR RVDVIGDGYD VALRVRSTLD DSNLVVRSFG VSDQVLVASP SFVAEHGPFE TPESMRGVMG VGVDGAAGER TRWRLTAPEG GAVDIEYTPA LVTDDLYLMG QTALAGIGVA QLPFNLCAEP VRDGRLVVLL PEYRLPVHQF HAVFPSRRGL VPAVRVFIEF LAEELPGMTA NVSRCYEDIV RQPDR
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