Gene Rpic_4140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4140 
Symbol 
ID6285551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp410495 
End bp411253 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content65% 
IMG OID642618627 
Productprotein of unknown function DUF81 
Protein accessionYP_001892668 
Protein GI187926323 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATCTG CCACGCTGCT GCTTTTTGGC GCGGGCCTGC TCGCCGGCAT GATGAATGCC 
CTGGCGGGCG GCGGCTCGTT TGTCACCCTG CCCGCGCTCA TGTTCGCAGG GGTTCCGTCG
GTGTTTGCCA ATGCGTCGAG CACGGTCGCG CTGCTACCCG GCGCGGCCAC GTCGGCGTGG
GCGTATCGCG CGGACTATCG CGGGTTCGGG CACGTCTCGA TGCGCGCCAT GGTGGGGATC
AGCCTTGTGG GGGGGCTGTT CGGCGCGCTG CTGTTGATGA ACACGTCGTC TCGCGCGTTC
GATTTCATCG TGCCGTGGCT GCTGCTGGTC GGCTCTCTGG CGTTCACCTT CGGCAAACAG
GTCGGTGTAT GGCTGCGCCA GCGTGTGCAG ATCGGGCGGA CAACGCTGCT GGTGGCGCAA
GGTGCGCTGG CCATCTATGG CGGCTATTTT GGCGGCGCAG TGGGGATCAT GATGATGGCG
GTCTGGGCAC TGTTCGGCCA CGACGACATC AAAGCACTGA ACGCCTCACG CACCTTGCTG
GTGGGCGCGA CCAACCTTGT GGCGGTGGCC TGTTTTGCGC TGGCAAACAT GGTGTGGTGG
CCGCAGACGC TGGTCATGCT GGTGGCCGCC GCACTGGGCG GTCATCTCGG CGCGCATGTT
GGCAAGCGTT TGCCGGTGCC GGTTGTGCGG GCGTTGATTT CCACTTTCGG CTTTTCGATG
ACGGCGCTGC TGTTCTGGCG CGCCTGGTCG CACGCTTGA
 
Protein sequence
MESATLLLFG AGLLAGMMNA LAGGGSFVTL PALMFAGVPS VFANASSTVA LLPGAATSAW 
AYRADYRGFG HVSMRAMVGI SLVGGLFGAL LLMNTSSRAF DFIVPWLLLV GSLAFTFGKQ
VGVWLRQRVQ IGRTTLLVAQ GALAIYGGYF GGAVGIMMMA VWALFGHDDI KALNASRTLL
VGATNLVAVA CFALANMVWW PQTLVMLVAA ALGGHLGAHV GKRLPVPVVR ALISTFGFSM
TALLFWRAWS HA