| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4136 |
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| Symbol | |
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| ID | 6285541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | + |
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| Start bp | 405891 |
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| End bp | 408209 |
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| Gene Length | 2319 bp |
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| Protein Length | 772 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642618623 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001892664 |
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| Protein GI | 187926319 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.163344 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.377911 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATTCC ACAAGCGCGC TGGGGCCGCC GCCCTTAAGC GCACGCTCGT GTGCCGCGCT
GCGCTCGCGC TGAGCGCAGC AGCACCACTG TCTGCTTTCG CTGCCGAGGA TGCGGCATCC
GTGCCCGCGC CCGTCACGCA GGAACTTGCG CCCACCGTGG TGCGGGCCAA CGCCAACCCC
GCGCCGTTCG CCCGCAATAC GCCGGCGGTC GTGCAAAGCG TCACAGCCGA TCAACTGGCC
GATCGCAACG TCGTCACTGC CGAAGACGCC GTCAAATACC AGCCCAATGT GATGGTGCGC
CGCCGCTTCA TTGGCGACCG CAACTCCATC TTCGCCGGCC GCGACTTCAA CGAGATCCAA
AGCGCACGCG GTCTGCTGTA TGCCGACGGC ATCCTGCTCT CGAACCTGCT TGGCTCCAGT
TACAGCTACC CGCCGCGCTG GTCCATGGTC GGGCCGGATG AACTTGCGCG CGTCGATATT
TTGTATGGGC CGTTCTCGGC GCTGCTGCCT GGCAACTCGA TGGGGACGAC CATCGCGATG
ACCTTGCGCC GCCCAGAAAA ATTCGAGGCC GCGGCGCAGA CGCAGATCAT GAGCCAGCAT
TACAACGATG CCTACGGCTT TTCGCGCAAC GTCACCGGAA ACCACGAAAG CGCATCGCTG
GGCGACCGCA TCGGCAAGTT CTGGTATGCG CTGTCAGTCG ACCGGCTGGA GAACGACAGC
CAACCGATGC AATACGCCAC GCCCAACTCC CGGTTCACCG CAGGCGGCAC GCCGGTGCCG
GTCACGGGTG CGCGGCAGGA TCTCGGCCCC AATGGCCAGC CGCGCGTGAT TCTCGGGCCG
CAGATGCTGG AGCGTACGCA GCAACTGCAA GAGACGCTGC GATTCGGCTA CGTATTCAGC
GACAGCCTGG AGGCGTCGCT CACGCTGGGC CACTGGGAGA ACCACTTCAA CGATCAGGCG
CTCAGCTTCC TGCGCGATGC CGCCGGCAAC ACCGTCACGG GCGGCAATGT GCTGATCAAC
GGCACGCCGT ACACGATCGC CCCGAACACC TTCGCCCCGC AAAACGGCGA CCAGGAAAAC
TGGCTCTACG GCCTGGGCGT GAAGGGCAAG ATCGGCGGCT GGAAGATCGA CACCAACGCG
TCGGCCTACA ACGTCTCACG TGACATCCTG CGCGCGTCGA ACACGGCGGC CGGCAATGGG
CCCGGCACGG TGTTCTACGG CGACGGCACG GGCTGGTCCA ACTTCGACAT CAAGGCGACG
TCGCCCACGG TGTCCGGCCA TACCTTCACG ACCGGCTACC ACTACGACCA ATACCACCTG
CGCAACCAGA CCTTCAACGC GAGCAACTGG TCAACGGAAA CACTATCCAC GCTCAAATCC
AGCTACCAGG GCGACACGCA AACGCAGGCC GTCTTCCTGC AGGACGCGTG GGCGTTTGCG
CCGCGCTGGC TGGCCACACT GGGCCTGCGC TACGAAAGCT GGCGCGCCTA CAACGGCCAG
CTCGGCAACG GCACGAGCGC GTTGGGCTAC GCCAGCCGTA CCGAAGACGC GTTTTCGCCC
AAGGCGGCCA TTCAATGGCA GGCCACGCAA GACACGCTGC TGCGCTTGTC GTATGGCTGC
GCCGTGCGCT TTCCGACGGT GGCGGAGCTG TTCCAGGGCA CGATCAGCGG CAACACGATC
GTCAACAACG ACCCGAACCT CAAACCTGAG CGCGCCAATG ATTTCGACTT CACCGTCGAG
CAGGCTGTGC CCTACGGCGT ATTGCGTACC AGCCTGTTCC AGAGCGACGT GCGCGACAGC
ATCTACACGC AGACCAACAT CACCGTTACG CCCAACGTGA CGAACGTGCA GAACGTCGAT
CGCGTGCGCA CGCGCGGCAT CGAGTTGGCG TATTCGGGGC AGGAGGTTCT GCAGGATGCG
GGTGTGCGCG GCGTGGACGT TGAAGCCAAC GTCGCTTTCA CGCAATCGAA GACGCTGGCC
GACGCCGCCA ACCCGACCTA CGTCGACAAG ACCTGGCCGC GCATGCCGCG GGTGCGCGCC
AATCTCTTTG CGAGTTGGCA TGCCACGCCT GACTGGACGG TGGGCGCGGG CGTGCGGTAT
TCCGGGCGGC AGTACGGCAC GCTCGACAAC ACCGATGTGC TGCCGAACGT CTACGGTGGC
ACGAGCAGCT TCTTCACCGT GGACCTCAAG GCTAGCTACC GTATCGACAA GCACATCACG
CTGGCGCTGG GCGTCGACAA TCTGACCGAC CGGCGGTACT TCGTGTACCA CCCGTATCCG
TCGCGCACCT TCTATGGACA ACTGAAATGG CGTCTGTAA
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| Protein sequence | MSFHKRAGAA ALKRTLVCRA ALALSAAAPL SAFAAEDAAS VPAPVTQELA PTVVRANANP
APFARNTPAV VQSVTADQLA DRNVVTAEDA VKYQPNVMVR RRFIGDRNSI FAGRDFNEIQ
SARGLLYADG ILLSNLLGSS YSYPPRWSMV GPDELARVDI LYGPFSALLP GNSMGTTIAM
TLRRPEKFEA AAQTQIMSQH YNDAYGFSRN VTGNHESASL GDRIGKFWYA LSVDRLENDS
QPMQYATPNS RFTAGGTPVP VTGARQDLGP NGQPRVILGP QMLERTQQLQ ETLRFGYVFS
DSLEASLTLG HWENHFNDQA LSFLRDAAGN TVTGGNVLIN GTPYTIAPNT FAPQNGDQEN
WLYGLGVKGK IGGWKIDTNA SAYNVSRDIL RASNTAAGNG PGTVFYGDGT GWSNFDIKAT
SPTVSGHTFT TGYHYDQYHL RNQTFNASNW STETLSTLKS SYQGDTQTQA VFLQDAWAFA
PRWLATLGLR YESWRAYNGQ LGNGTSALGY ASRTEDAFSP KAAIQWQATQ DTLLRLSYGC
AVRFPTVAEL FQGTISGNTI VNNDPNLKPE RANDFDFTVE QAVPYGVLRT SLFQSDVRDS
IYTQTNITVT PNVTNVQNVD RVRTRGIELA YSGQEVLQDA GVRGVDVEAN VAFTQSKTLA
DAANPTYVDK TWPRMPRVRA NLFASWHATP DWTVGAGVRY SGRQYGTLDN TDVLPNVYGG
TSSFFTVDLK ASYRIDKHIT LALGVDNLTD RRYFVYHPYP SRTFYGQLKW RL
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