Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4129 |
Symbol | |
ID | 6285533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 399261 |
End bp | 401411 |
Gene Length | 2151 bp |
Protein Length | 716 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642618616 |
Product | UvrD/REP helicase |
Protein accession | YP_001892657 |
Protein GI | 187926312 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.248722 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.188822 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTTGCCG CCTCCCCCAC CCCAGACACC GCCAATGCGC CGGCCACGCC GGGTTACCTG GCCCAGCTGA ACGACCAGCA GCGCCAGGCA GTCGAGTTCG GTATCTCTGG AGCGGACGCG GCGGAAACCG GGCCGCTGCT CGTGCTGGCC GGCGCAGGGT CCGGCAAGAC GCACACGCTG GGCTGGCGCG TGGCGCATCT GGTGGCCAAC GGCGCCGATC CGCAACGCAT CCTGCTGCTG ACGTTTTCCC GCCGGGCGGC GAGCGAACTG TCGAACCGTG CCGGCCACCT GCTGGCGCGA GCCATGCAGG GCGAGCGATC GAACAACGCC CTCAATTCGG CCGGCACGTC GTACAAGACC ACGCTGCCCT GGGCGGGCAC CTTCCACGGC ATCGGCGCGC GCCTGCTGCG CGAATATGCC GAGCGCGTGG GCCTCGCCCC CGATTTCACC ATCCATGACC GCAGCGACTC GGCCGATCTG CTCAACGTCG TGCGCCATGA GCTGAACCTG TCGACCAAGG AACGCCGCTT CCCGCTCAAG CAGACCTGCA TTGCGATCTA CTCGCGCGCC ATCAACGCCG AGAGCCCGCT GAACGCCGTG CTGAAGCACC ATTTTCCGTG GTGCGCGATG TGGGAAACGC AATTGCGCAC GCTGTTCGAT GCGTATGTCG AAGCCAAGCA AGCGCAGCAC GTGCTCGACT ACGACGACCT CCTGCTCTAC TGGCACGCGA TGGTGTCCGA CGCCGAACTG GCGGCCGAGA TTGGCGCCCG TTTCGACCAC ATCCTCGTCG ACGAATACCA GGACACCAAC CGGTTGCAGT CATCCATCCT GCGTGCGTTG CGCCCGGACG GCCGCGGTGT GACCGTGGTG GGCGACGACG CGCAATCGAT CTACGCATTT CGCGCGGCGA CGGTACGCAA CATCCTCGAT TTTCCGCGCC ACTTCTCGCG GCCGGCGCAC ACGGTGCTGC TGGAGCGCAA TTACCGGTCA ACGCAACCGA TTCTGGATGC CTCCAACGGC GTGATGCGTT TTGCCACGGA GCGCTTTGCC AAGACGTTGT GGACGGACCG CGCATCGACG CATCGGCCGC GCTTGATTTC AGTGCGTGAC GAGGCCGAGC AGGCGCGTTG CGTGGCTGAG CAGGTGCTGC ATCACCGTGA AGGCGGGCTG ACGCTGAAAT CGCAGGCGGT GCTGTTTCGC ACCGCGAGCC ACAGCGCGCC GCTGGAGATC GAACTCACGC GCCGCAACAT CCCGTTCGTG AAATACGGCG GCCTCAAGTT TCTGGAGGCG GCACATGTGA AGGATGTGCT GTCGGTACTG CGCTGGGCCG AGAACCCGCG CAACCGCATT GCCGGGTTTC GCGTGATCCA GTTGCTGCCA GGTGCAGGCC CCGCCACGGC GGCACGCGTG CTCGACGCCA TGGCGGAAGC GGCGGACCCG ATTGCCGCGC TGCTCGCCTA CGAGCCACCG GCGCGGCTGG CCGGCGACTG GTCTACGCTG ATGGCGCTCA TGCAAACCCT GCGCGTGCCC AAAGACAGCC TGGAATGGGC TGGCGAACTC GAAGCCGTAG GCGCTTGGTA CTCGCCGCAC ATGGAGCGCC TGCACGACGA CGCGGCCGTG CGCCAGGGCG ATCTCGACCA GCTCGCCCGC ATGGCCGCAA CGTACGCCAC CCGGGAGCGC TTCCTGACCG AGATGACGCT CGACCCGCCC GAGTTGACCA GCGATGAATC GGGCGACCCA TACCGCGACG AGGACTACCT GATCCTCTCG ACGATCCATT CGTCGAAAGG TCAGGAATGG AAGGCGGTGT ATGTGCTGAA TGCCGTGGAC GGCTGCATGC CGGCCGATCT GGGCGCCGGC TCGCACGAAG AACTGGAAGA AGAACGCCGG CTGCTCTACG TGGCGATGAC CCGTGCGCGT GAGCACCTCG ACATCCTGGT GCCCCAGCGT TTCTACGTCA CCCAGCAAAC ACCCAATGGC GATCGGCACA TCTACGCGTC GCGCACGCGC TTCATTCCGC CTGCGCTGCT GCCGCTGTTC GAAGCCTGCG CATGGCCGGA ACCGGAGCCC GGTGCAGACC CCGCAGCCGA GGCGCGTGCC GCGGCCAAGG TCGACCTGAG CAAGAAGATG CGCGGCTACT GGAAAAAGTA G
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Protein sequence | MLAASPTPDT ANAPATPGYL AQLNDQQRQA VEFGISGADA AETGPLLVLA GAGSGKTHTL GWRVAHLVAN GADPQRILLL TFSRRAASEL SNRAGHLLAR AMQGERSNNA LNSAGTSYKT TLPWAGTFHG IGARLLREYA ERVGLAPDFT IHDRSDSADL LNVVRHELNL STKERRFPLK QTCIAIYSRA INAESPLNAV LKHHFPWCAM WETQLRTLFD AYVEAKQAQH VLDYDDLLLY WHAMVSDAEL AAEIGARFDH ILVDEYQDTN RLQSSILRAL RPDGRGVTVV GDDAQSIYAF RAATVRNILD FPRHFSRPAH TVLLERNYRS TQPILDASNG VMRFATERFA KTLWTDRAST HRPRLISVRD EAEQARCVAE QVLHHREGGL TLKSQAVLFR TASHSAPLEI ELTRRNIPFV KYGGLKFLEA AHVKDVLSVL RWAENPRNRI AGFRVIQLLP GAGPATAARV LDAMAEAADP IAALLAYEPP ARLAGDWSTL MALMQTLRVP KDSLEWAGEL EAVGAWYSPH MERLHDDAAV RQGDLDQLAR MAATYATRER FLTEMTLDPP ELTSDESGDP YRDEDYLILS TIHSSKGQEW KAVYVLNAVD GCMPADLGAG SHEELEEERR LLYVAMTRAR EHLDILVPQR FYVTQQTPNG DRHIYASRTR FIPPALLPLF EACAWPEPEP GADPAAEARA AAKVDLSKKM RGYWKK
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