Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4128 |
Symbol | |
ID | 6285531 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | + |
Start bp | 397763 |
End bp | 399235 |
Gene Length | 1473 bp |
Protein Length | 490 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642618615 |
Product | drug resistance transporter, EmrB/QacA subfamily |
Protein accession | YP_001892656 |
Protein GI | 187926311 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.422777 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.15166 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGCTG CGTCGCACAT CTGCCGGTTC TGCCCCCGCC CCATGCCCAC CACGCCCTCC GCCTCCCTCG ACACCTCTCT GAAACCGTTG CTCTGGCTGG TGGCGATGGG ACTGTTCATG CAGACGCTCG ATTCCACGAT CGTCAACACC GCGTTGCCGG CCATGGCACG CAGCCTGTCG GAAAGCCCGC TGAAGATGCA GTCGGTCATC ATCGCCTACA CGCTGACGAC CGCCATGCTG ATGCCTGCGT CGGGATGGCT GGCCGATCGC TTCGGCACGC GGAAGATGTT CTTTGCTGCC ATCTTTCTCT TCACCATTGG TTCCTTGCTC TGCGCGGAGT CCCGCAGCCT GACCATGCTG ATTGCCTCGC GCGTGGTGCA GGGTGTGGGC GGCGCGCTGC TGATGCCCGT GGGGCGGCTG ACGGTGCTGC GCGTGGTGCC GCGCGAGCAG TTCTTGCCGG CCATGAGTTT CGTCACCATC CCCGGGCTGA TCGGCCCGCT GATCGGCCCG ACGCTGGGGG GCTGGCTGGT GGAAGCCGTG TCGTGGCACT GGATCTTCCT GATCAACATT CCCGTGGGCG TGATCGGCGC GCTGGTCACG CTCAAGGTGA TGCCCGATGT GCACGCAGAA GACGACAGCC GCTTCGACTG GTCCGGCTAT CTGATGCTGG CCTTCGGCAT GGCGGCGGTA TCGTTTTCGC TCGACGGGCT GTCGGAGCTC GGCTTCCAGC ACGCGACGGT GCTGGTGCTG CTGGTCTTCG GTCTGGCCGC ACTCACCGCC TATTGGCTGC ACGCGGGGCG TGTGGCCGGG CCGCTGTTTC CGCGCACGCT GTTCGGTATT CCGAGCTTTT CCATTGGTGT GCTCGGCAAC CTGTTTGCAC GCATCGGCAG CGGCGGGATG CCGTTCCTCA TTCCGCTGCT GCTGCAGGTG AGCCTGGGGT ACACGCCGCT GCAGGCGGGG CTGATGATGG TGCCGGTGGC CGCAGCCGGC ATGGCCGCCA AGCCACTGGG CACCTGGGCC ATCAAGCGCT ACGGCTATCG CCGCATGCTG TCCGTCAACA CGGTCATGGT CGGCCTGATG ATGGCCAGCT TTGCCGTGAT GACGCCCAAC GTGCCGGTGT GGCTGCGCAT CGTGCAACTG GCGATCTTCG GCACGTTCAA CTCGATGCAG TTCACGGCCA TGAACACGCT CACGCTCAAG GACCTGACGG GCCCCCTGGC CAGCGCGGGC AACAGCATGC TCTCGATGGT GATGATGCTG TCGATGAGCC TGGGCGTGGC CGCAGCCGGC GCGTTGCTGA CGGGCTTTAC CGACTTCACC GCCGGACCGG AAGGGCGCGA CACGCTGGCG GCGTTCCACA AGACGTTTGT CTGCGTGGGC GTCATGACCT GCGCGGCTGC GTGGATCTTT GCCCAGCTCT CGCGCTTCGA GTCAACGCAC GTCGTCAAGC GGCCCGAGAT GGAAGTGCAT TGA
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Protein sequence | MTAASHICRF CPRPMPTTPS ASLDTSLKPL LWLVAMGLFM QTLDSTIVNT ALPAMARSLS ESPLKMQSVI IAYTLTTAML MPASGWLADR FGTRKMFFAA IFLFTIGSLL CAESRSLTML IASRVVQGVG GALLMPVGRL TVLRVVPREQ FLPAMSFVTI PGLIGPLIGP TLGGWLVEAV SWHWIFLINI PVGVIGALVT LKVMPDVHAE DDSRFDWSGY LMLAFGMAAV SFSLDGLSEL GFQHATVLVL LVFGLAALTA YWLHAGRVAG PLFPRTLFGI PSFSIGVLGN LFARIGSGGM PFLIPLLLQV SLGYTPLQAG LMMVPVAAAG MAAKPLGTWA IKRYGYRRML SVNTVMVGLM MASFAVMTPN VPVWLRIVQL AIFGTFNSMQ FTAMNTLTLK DLTGPLASAG NSMLSMVMML SMSLGVAAAG ALLTGFTDFT AGPEGRDTLA AFHKTFVCVG VMTCAAAWIF AQLSRFESTH VVKRPEMEVH
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