| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4126 |
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| Symbol | |
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| ID | 6285527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | - |
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| Start bp | 395095 |
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| End bp | 396141 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642618613 |
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| Product | diguanylate cyclase with GAF sensor |
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| Protein accession | YP_001892654 |
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| Protein GI | 187926309 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2203] FOG: GAF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.859123 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0985842 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCCG CTCCCATCCC CACGAACGAA CCCGAACGTC TTGCCTCGCT GCAAGACATG
CTGTTGCTCT CCACACCCGA CGAGGAGTTG TTCGACCGCG TCACGCGCAC GACCAAGCGC
GTGTTCGACG CCCCGATTGT GCTCGTGTCG CTCATCGACG CCCAGCGTCA ATGGTTCAAA
TCCTGTATCG GCTTGAACGT GCGCGAGACC GGGCGCGACA TCTCGTTCTG CGGCCATGCC
GTGGCCGAAG ACCAGATGCT CGTCATTCCA GACACCAAGG CCGACCCGCG CTTTGCCGAC
AACCCGCTCG TGACGGGCGC GCCGCATATC CGCTTCTATG CTGGGCGGCC GGTCAGGAAT
CTGTCTGGCT ATGCCGTGGG CACGCTCTGC GTGCTCGACA AGAAGCCGCG GTCGTTTGAC
CAGGCCGAGC GGGAGCTGCT CAATGACCTG GCCAGTTGGG TGGAATCGGG ATTTCGCGAG
CGCGAACTGA GCGAAACGCA GCGCTCCATC CTGACCGAGC TGCAGATTGC GCGCCACGAA
AGCCTGACGG ATCCGATGCT GGGCATCTGG AACCGGCGCG CCGCGATGGA ACTGCTCACG
CGCGAGTGCG GCCACGCGAT GCGGTACGGG CAGCCGCTTT CATTGCTGGT GGTGGATGTT
GACCACTTCA AGCGCGTGAA CGATACCTAC GGCCACCCCG TGGGCGATGC GGTCTTGGTT
GAGATCGCTC GCACGCTGCG GGTGAATTCG CGCCCCATCG ATGCAGTGGG CCGCTACGGC
GGCGAGGAAT TCCTGGTGGT TCTGCCCGAT ACGACCACAC TGCAGGCCAG CGACATTGCG
GAACGCCTAC GCAGCGCGGT GGAGTCGCTG GAGATCGCCA CGCCGGAAGC CAACATCCGC
AGCTCCATCA GCGTAGGCCT GGCAAGCTGC GAGCCGGAGA AGAACCTGTG CACGCCGACA
GACCTCATCA TGCGTGCCGA TGCCGCCCTG CTGGCCGCCA AACGGCTGGG GCGCAATCGC
GTGATATTCG ACGGACAGCC GGTGTAG
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| Protein sequence | MKPAPIPTNE PERLASLQDM LLLSTPDEEL FDRVTRTTKR VFDAPIVLVS LIDAQRQWFK
SCIGLNVRET GRDISFCGHA VAEDQMLVIP DTKADPRFAD NPLVTGAPHI RFYAGRPVRN
LSGYAVGTLC VLDKKPRSFD QAERELLNDL ASWVESGFRE RELSETQRSI LTELQIARHE
SLTDPMLGIW NRRAAMELLT RECGHAMRYG QPLSLLVVDV DHFKRVNDTY GHPVGDAVLV
EIARTLRVNS RPIDAVGRYG GEEFLVVLPD TTTLQASDIA ERLRSAVESL EIATPEANIR
SSISVGLASC EPEKNLCTPT DLIMRADAAL LAAKRLGRNR VIFDGQPV
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