Gene Rpic_4125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4125 
Symbol 
ID6285526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp394668 
End bp395093 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content68% 
IMG OID642618612 
ProductS-adenosylmethionine decarboxylase proenzyme 
Protein accessionYP_001892653 
Protein GI187926308 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1586] S-adenosylmethionine decarboxylase 
TIGRFAM ID[TIGR03330] S-adenosylmethionine decarboxylase proenzyme, Bacillus form 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0829809 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCGCA CCGATGCAGC GCTTTCTGTG GAAGAAGCAC CCGCCGCCGT GGGCGAGCAT 
CTGCTGCTCG ATCTGTATGG CGTTGCGCCT GTGCTGTTGC GCGATGCGGC CACACTGGAA
ACCGCACTGC GCGATGCTGC CAACGCACTG GGTGCGACCA TCCTGCATGC ACATCTGCAT
CGCTTCGATT CCGTGCGCGC CGGTTTGCCC GGTGGCGAGC AGGGCGGCGT GACCGGTGTG
TTGCTGCTCG CCGAATCGCA TCTTTCGATT CACACCTGGC CCGAGCACGG GTTTGCCGCC
ATCGACGCGT TCATGTGCGG CACCGGCACA ACGCATGCCG CGCGCGCCGT GTTCGAGCGC
GCGTTGGCGC CGGAACGGGT TGACGTGCGC GTCGCCCGCC GCGGCGGCGA GCCCGCGCCC
CACTGA
 
Protein sequence
MTRTDAALSV EEAPAAVGEH LLLDLYGVAP VLLRDAATLE TALRDAANAL GATILHAHLH 
RFDSVRAGLP GGEQGGVTGV LLLAESHLSI HTWPEHGFAA IDAFMCGTGT THAARAVFER
ALAPERVDVR VARRGGEPAP H