| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4113 |
|---|
| Symbol | |
|---|
| ID | 6285499 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010678 |
|---|
| Strand | + |
|---|
| Start bp | 383983 |
|---|
| End bp | 384768 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642618600 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001892641 |
|---|
| Protein GI | 187926296 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.442107 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.228031 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGGGTG CACGCATTGC GCGCGCGATT GGAACGGCGG TTGTGTTCTC GGCATTTGCG
CTGCCGGCGC ACGCGGTGTT GCCTGACGAG ATCCAGGTCT ACACCGGTGA TATCAACGCG
CCGGGCGAGT TCGGGCTGGA GCTGCACGTC AACACCACGC CCAGCGGCAT CGGCACGCCA
AGCTATCCAG GCGAAGTCAC GACACCGCAC GGCTGGCGTG CCACGGCGGA GTTCTCGTAT
GGCCTGACGC CCTCGCTGGA GCTGGGGCTC TATGTGCCGA CCACGCTCAC GCGCGAGAAC
ACGTTCTACG TGACCGGCCC GAAGGTGCGG GTGAAATGGA TGCCCATGCG CCCGGTTGAT
GGCGTAGGGA ACTTTGCAGG CATCAACGTC GAACTTGCCC ACGTGGCAGG CCGCTTTGAG
GCATCCCAGA ACGCGGCAGA ACTGCGACCC ATCTATGGGT ATCAGAACGA CCGCTGGCTT
TGGGCAGTCA ACCCGGTGCT CGATTGGAAT CTCTCGGGGG ACGGGCGCAG CGGCGTGCCG
GAGGCCGCGC CCAGTTTCAA GATTGCACGT ACGGTTGCGA CAGGGGTGCG CGCCGGCACG
GAGTATTACG CCGGGCTTGG CCCCATCAAC CACATCGCGC CTTTGCATGA GCAGCAGCAC
ACGGTGTTCC TGGCGTTCGA CGTGGACCGC AAGCCGTTCG TCTTCAACTT TGGCATCGGC
CGCGGCCTGA CACGCGCCTC AGACCGCTGG ACGCTGAAGT GGATTTTCGA GATTCCGCTG
AGCTGA
|
|---|
| Protein sequence | MVGARIARAI GTAVVFSAFA LPAHAVLPDE IQVYTGDINA PGEFGLELHV NTTPSGIGTP
SYPGEVTTPH GWRATAEFSY GLTPSLELGL YVPTTLTREN TFYVTGPKVR VKWMPMRPVD
GVGNFAGINV ELAHVAGRFE ASQNAAELRP IYGYQNDRWL WAVNPVLDWN LSGDGRSGVP
EAAPSFKIAR TVATGVRAGT EYYAGLGPIN HIAPLHEQQH TVFLAFDVDR KPFVFNFGIG
RGLTRASDRW TLKWIFEIPL S
|
|---|
| |