Gene Rpic_4111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4111 
Symbol 
ID6285497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp381972 
End bp382871 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content67% 
IMG OID642618598 
Producttranscriptional regulator, AraC family 
Protein accessionYP_001892639 
Protein GI187926294 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.596036 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.240547 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCA TCACGCCTCT CGCCTTGCTT GAATCCGCTC CAGTCAGCCT GCGCTCCAGC 
GACGGGCTTG GTTGGGACGG CTTTGCCGCC ACGCTGCTCG GGATCCGCGC CGGCGCGTAC
CGGGTGCCGG CCATGGCGCA GCACCGGGTC AACGTGCATG TCGGCCCGCC TGTGCGGATG
AATTGCGTAT GCGATGGCCG CCGCTATTCA CGCATCCAGG CACACGGCGA TGCGGACGTG
ATTCCCGCAG GCGTGCCCGG CATGTGGACG GACGATGCCG ACTGCCGGAT TCTGCGGATC
GCCATCAGCG ACACGTCTGT ACGCAGCATC GCCGAACAGA TTGGCGTGCG AGCCGACATC
ACGCCGCGTC TGCAATGGCG CGATGCGCGC GTGCGTCATC TTGCCGCAGC GTTGGGGGCT
GAGCTGCTAG CGGAGGACAC CTCCGACGCG TTATATGCAG AGGGCCTGTG CACGGCGTTG
GTCGTTCGTC TGCTCAGCAG CAGTCGGGAT GGTGCCGCCG GTGTGGCCGA CCGCACCGGC
ACGTTGGCGC CTCGCGTGGC TACGCGCGTG ATCGACTACA TCGAAGCCCA TCTGCATGCG
CGCCTGACGC TGGCTGAGCT GGCCGCGCAG GCCGGCTTAA GCGTGCCCCA TTTCAATGTG
CTGTTTCGTG CAACGCTGGG TGTGCCGGCG CATCGCTACG TCGTGCAGCG CCGGGTGGCG
CGCGCAAAAG CGTTGCTGTT GGAAGGCCGT CGCAGTGCGT CGCAGATTGC GCTAGACGTG
GGCTTTGCGC ACCAGAGCCA TATGACGGAG TGGATGCAGC GGTTGCTCGG CGTCACGCCC
CGTGACGTCA TCCGCGCCGG CAAGGCGTTG GCCGCGGCTG CGGACCCGCC GGCTGCGTAG
 
Protein sequence
MNAITPLALL ESAPVSLRSS DGLGWDGFAA TLLGIRAGAY RVPAMAQHRV NVHVGPPVRM 
NCVCDGRRYS RIQAHGDADV IPAGVPGMWT DDADCRILRI AISDTSVRSI AEQIGVRADI
TPRLQWRDAR VRHLAAALGA ELLAEDTSDA LYAEGLCTAL VVRLLSSSRD GAAGVADRTG
TLAPRVATRV IDYIEAHLHA RLTLAELAAQ AGLSVPHFNV LFRATLGVPA HRYVVQRRVA
RAKALLLEGR RSASQIALDV GFAHQSHMTE WMQRLLGVTP RDVIRAGKAL AAAADPPAA