Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4111 |
Symbol | |
ID | 6285497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | + |
Start bp | 381972 |
End bp | 382871 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642618598 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_001892639 |
Protein GI | 187926294 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.596036 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.240547 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCCA TCACGCCTCT CGCCTTGCTT GAATCCGCTC CAGTCAGCCT GCGCTCCAGC GACGGGCTTG GTTGGGACGG CTTTGCCGCC ACGCTGCTCG GGATCCGCGC CGGCGCGTAC CGGGTGCCGG CCATGGCGCA GCACCGGGTC AACGTGCATG TCGGCCCGCC TGTGCGGATG AATTGCGTAT GCGATGGCCG CCGCTATTCA CGCATCCAGG CACACGGCGA TGCGGACGTG ATTCCCGCAG GCGTGCCCGG CATGTGGACG GACGATGCCG ACTGCCGGAT TCTGCGGATC GCCATCAGCG ACACGTCTGT ACGCAGCATC GCCGAACAGA TTGGCGTGCG AGCCGACATC ACGCCGCGTC TGCAATGGCG CGATGCGCGC GTGCGTCATC TTGCCGCAGC GTTGGGGGCT GAGCTGCTAG CGGAGGACAC CTCCGACGCG TTATATGCAG AGGGCCTGTG CACGGCGTTG GTCGTTCGTC TGCTCAGCAG CAGTCGGGAT GGTGCCGCCG GTGTGGCCGA CCGCACCGGC ACGTTGGCGC CTCGCGTGGC TACGCGCGTG ATCGACTACA TCGAAGCCCA TCTGCATGCG CGCCTGACGC TGGCTGAGCT GGCCGCGCAG GCCGGCTTAA GCGTGCCCCA TTTCAATGTG CTGTTTCGTG CAACGCTGGG TGTGCCGGCG CATCGCTACG TCGTGCAGCG CCGGGTGGCG CGCGCAAAAG CGTTGCTGTT GGAAGGCCGT CGCAGTGCGT CGCAGATTGC GCTAGACGTG GGCTTTGCGC ACCAGAGCCA TATGACGGAG TGGATGCAGC GGTTGCTCGG CGTCACGCCC CGTGACGTCA TCCGCGCCGG CAAGGCGTTG GCCGCGGCTG CGGACCCGCC GGCTGCGTAG
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Protein sequence | MNAITPLALL ESAPVSLRSS DGLGWDGFAA TLLGIRAGAY RVPAMAQHRV NVHVGPPVRM NCVCDGRRYS RIQAHGDADV IPAGVPGMWT DDADCRILRI AISDTSVRSI AEQIGVRADI TPRLQWRDAR VRHLAAALGA ELLAEDTSDA LYAEGLCTAL VVRLLSSSRD GAAGVADRTG TLAPRVATRV IDYIEAHLHA RLTLAELAAQ AGLSVPHFNV LFRATLGVPA HRYVVQRRVA RAKALLLEGR RSASQIALDV GFAHQSHMTE WMQRLLGVTP RDVIRAGKAL AAAADPPAA
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