| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4107 |
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| Symbol | |
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| ID | 6285487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | + |
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| Start bp | 378084 |
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| End bp | 379184 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642618594 |
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| Product | branched-chain amino acid aminotransferase |
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| Protein accession | YP_001892635 |
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| Protein GI | 187926290 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR01123] branched-chain amino acid aminotransferase, group II |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.456695 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAACG TTGTCGAATC GGCTATTTCG ATCGAGAAGC GCCCGAACCC TGTTCCGGCG
GAAGAGCGCG CGCGCCTGCT GGAAAACCCC GCTTTCGGCC GCGTCTTCAC GGATCACATG
GCCACCATCC GCTACACCGA GGGCAAGGGC TGGCACGACG CCAAAATCGG CGCGCATGGC
CCGATCCAGT GCGATCCGTC CACGCTGGTG CTGCACTACG CGCAGGAAAT CTTCGAGGGC
ATGAAGGCCT ACCGCCTGCC GGACGGCGGC GGTGCGCTGT TCCGCCCGGA AGCCAATGCG
CGCCGGTTCC AGAATTCCGC CAAGCGCCTG GCGATGCCCG CGCTGCCGGA AGACCTCTTC
CTGCAGGCCG TGCGCGAGCT GGTCAAGCTC GATCGCGACT GGATTCCGTC GGGCCAGGGC
TCGGCGCTGT ACCTGCGCCC GTTCATGATC GCCACCGAAG TGGTCCTGGG CGTGAAGCCT
TCGGCCGAAT ACCTGTTCTG CGTGATTGCG TGCCCGGTGG GCGCGTACTT CAAGGGCGAT
GCATCGTCGG GCGTCACCAT CTGGGTGTCG GACAACTACA CGCGCGCCGC ACCGGGCGGT
ACGGGCGAGG CCAAGTGCGG CGGCAACTAC GCCGCCAGCC TGGTCGCTCA AGCTGAAGCC
ACCCGCGAGG GCTGCGACCA GGTCGTCTTC CTCGACGCGG TGGAGCGCAA GTGGATCGAA
GAGCTGGGCG GTATGAACGT GTTCTTCGTC TTCGATGACG GTTCGCTGCA GACGCCGCCG
CTGACTGGCA CGATCCTGCC GGGCATCACG CGCGATTCGT TGATCACGCT GGCGCGCGGC
ATGGGCCTGA CCGTGCGCGA AGAGCCGTAC TCCATCGACC AGTGGCAGGC CGACGCCCAA
AGCGGCCGCC TGCGTGAAGC CTTTGCGTGC GGCACCGCAG CGGTCGTCAC GCCCATCGGC
AAGGTCAAGG GCCACAAGCA CAACTTCACC ATCGGCGATG GCAAGGCAGG CGAGCTGACG
ACCAAGCTGA AGGCGGCGCT GGTCGATCTG CAGAACGGCC GCGCACCGGA CCCGCACGGC
TGGCTGGACC GCCTGTTCTG A
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| Protein sequence | MNNVVESAIS IEKRPNPVPA EERARLLENP AFGRVFTDHM ATIRYTEGKG WHDAKIGAHG
PIQCDPSTLV LHYAQEIFEG MKAYRLPDGG GALFRPEANA RRFQNSAKRL AMPALPEDLF
LQAVRELVKL DRDWIPSGQG SALYLRPFMI ATEVVLGVKP SAEYLFCVIA CPVGAYFKGD
ASSGVTIWVS DNYTRAAPGG TGEAKCGGNY AASLVAQAEA TREGCDQVVF LDAVERKWIE
ELGGMNVFFV FDDGSLQTPP LTGTILPGIT RDSLITLARG MGLTVREEPY SIDQWQADAQ
SGRLREAFAC GTAAVVTPIG KVKGHKHNFT IGDGKAGELT TKLKAALVDL QNGRAPDPHG
WLDRLF
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