Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4102 |
Symbol | |
ID | 6285484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 374596 |
End bp | 375258 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642618591 |
Product | bifunctional deaminase-reductase domain protein |
Protein accession | YP_001892632 |
Protein GI | 187926287 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0262] Dihydrofolate reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0938686 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.743066 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACGCG TTCGCGTTGC GGGCTTCACC CTCTCGCTTG ACGGATACGG CGCAGGTCCG GATCAGGACA TCAACAATCC GCTCGGCATT GGCGGGATGG AGCTGCACCA GTGGCTGGTC GCGACGCGCA CGTTCCAGCG GACCCTGTTC GGCAAGGACG GCGGTACAAC TGGCGTTGAC GATGACTTTG CCGCCCGTAG TTTCCGGAAC GTGGGGGCGT GGATTCTCGG GCGCAACATG TTCGGCCCCA TTCGCGGGGA TTGGCCCGAC GACAATTGGA AAGGCTGGTG GGGCGACAAC CCGCCGTATC ACGTTCCCGT TTTCGTGTTG ACCCACCACG CGCGTGCGCC CATCGAGATG GCGGGCGGCA CGACCTTCCA CTTCATCACA GGCGGCTTTC GAGAAGCGCT CGACCGTGCG CGCGAGGCCG CTGGCGGGAA GGATGTACGC ATTGGCGGAG GGCCGAGCAC CATCCGGCAG TACCTGCGTG AAGGCCTCAT CGATGAACTG CACATCGCGA TCTCGCCGGT CTTGCTTGGC CGAGGGGAAC CCCTGTTTGA GGGGATCGAC TTGCGAGCGC TGGGCTACGC GTGCGTTGAA TCCGTAGCAT CAGAAAAGGC GACGCATGTT GTTTTGCGGC GCCCATTGCC TACGAATACT TAA
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Protein sequence | MTRVRVAGFT LSLDGYGAGP DQDINNPLGI GGMELHQWLV ATRTFQRTLF GKDGGTTGVD DDFAARSFRN VGAWILGRNM FGPIRGDWPD DNWKGWWGDN PPYHVPVFVL THHARAPIEM AGGTTFHFIT GGFREALDRA REAAGGKDVR IGGGPSTIRQ YLREGLIDEL HIAISPVLLG RGEPLFEGID LRALGYACVE SVASEKATHV VLRRPLPTNT
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