Gene Rpic_4102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4102 
Symbol 
ID6285484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp374596 
End bp375258 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content63% 
IMG OID642618591 
Productbifunctional deaminase-reductase domain protein 
Protein accessionYP_001892632 
Protein GI187926287 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0262] Dihydrofolate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0938686 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.743066 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGCG TTCGCGTTGC GGGCTTCACC CTCTCGCTTG ACGGATACGG CGCAGGTCCG 
GATCAGGACA TCAACAATCC GCTCGGCATT GGCGGGATGG AGCTGCACCA GTGGCTGGTC
GCGACGCGCA CGTTCCAGCG GACCCTGTTC GGCAAGGACG GCGGTACAAC TGGCGTTGAC
GATGACTTTG CCGCCCGTAG TTTCCGGAAC GTGGGGGCGT GGATTCTCGG GCGCAACATG
TTCGGCCCCA TTCGCGGGGA TTGGCCCGAC GACAATTGGA AAGGCTGGTG GGGCGACAAC
CCGCCGTATC ACGTTCCCGT TTTCGTGTTG ACCCACCACG CGCGTGCGCC CATCGAGATG
GCGGGCGGCA CGACCTTCCA CTTCATCACA GGCGGCTTTC GAGAAGCGCT CGACCGTGCG
CGCGAGGCCG CTGGCGGGAA GGATGTACGC ATTGGCGGAG GGCCGAGCAC CATCCGGCAG
TACCTGCGTG AAGGCCTCAT CGATGAACTG CACATCGCGA TCTCGCCGGT CTTGCTTGGC
CGAGGGGAAC CCCTGTTTGA GGGGATCGAC TTGCGAGCGC TGGGCTACGC GTGCGTTGAA
TCCGTAGCAT CAGAAAAGGC GACGCATGTT GTTTTGCGGC GCCCATTGCC TACGAATACT
TAA
 
Protein sequence
MTRVRVAGFT LSLDGYGAGP DQDINNPLGI GGMELHQWLV ATRTFQRTLF GKDGGTTGVD 
DDFAARSFRN VGAWILGRNM FGPIRGDWPD DNWKGWWGDN PPYHVPVFVL THHARAPIEM
AGGTTFHFIT GGFREALDRA REAAGGKDVR IGGGPSTIRQ YLREGLIDEL HIAISPVLLG
RGEPLFEGID LRALGYACVE SVASEKATHV VLRRPLPTNT