Gene Rpic_4100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4100 
Symbol 
ID6285480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp373541 
End bp374110 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content58% 
IMG OID642618589 
Producthypothetical protein 
Protein accessionYP_001892630 
Protein GI187926285 
COG category[S] Function unknown 
COG ID[COG4430] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0708804 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.708257 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAATC CAAAACTTTC CTTCATCAAT CAGGAAGCCT GGGAAGCCTG GCTGGAAACC 
CACGGAGAGA CTGTGACCGG TGTCTGGCTC CGCATCGCAA GGCGGTCGGC CGAACAATCC
ACCGTGTCTT ATGCAGAGGC CGTTGAGAGC GCCCTCTGCT ATGGATGGAT CGACGGGCAA
AAGCAGGCGG AAAACGAGCA CTACTGGCTG CAGCGGTTCA CGCCCAGAAC CGCCAAGAGC
ATCTGGTCGA AGATCAACAC CGCCAAGGCT GAAGCCTTGA TCACCGCCGG GAGAATGCGC
CCTGCAGGGC TTCGCGCAAT CGAGCTGGCC AAGCAAGACG GCCGCTGGGA GGCGGCCTAT
TCGCCTGCGG GTACGTCAAC CGTGCCGGAT GACCTGCAGC AGGCTTTGGA TGCCAACCCG
AAGGCCAAGC AATTCTTCGC TACCTTGAAT GGCCAGAACC GGTACGCGAT TCTGTTCAGG
ATCCAGAACG TAAAGAAGGC CGAGACGCGT GCCAAGAAGA TTACTCAGTT CATCGACATG
CTGAACAAGG GCGAGAAGCT TCATCCATAG
 
Protein sequence
MHNPKLSFIN QEAWEAWLET HGETVTGVWL RIARRSAEQS TVSYAEAVES ALCYGWIDGQ 
KQAENEHYWL QRFTPRTAKS IWSKINTAKA EALITAGRMR PAGLRAIELA KQDGRWEAAY
SPAGTSTVPD DLQQALDANP KAKQFFATLN GQNRYAILFR IQNVKKAETR AKKITQFIDM
LNKGEKLHP