Gene Rpic_4099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4099 
Symbol 
ID6285479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp373130 
End bp373492 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content60% 
IMG OID642618588 
Product3-dehydroquinate dehydratase 
Protein accessionYP_001892629 
Protein GI187926284 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0757] 3-dehydroquinate dehydratase II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0790869 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.677158 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTTCGTG CAACTATCAG ATTGCAGGCG TTGGGCGCCG AACCTGGCGT GCAGGTGGAG 
TCATTCCAAA CCAACAGCGA AGCGGCGATG TGCGAGCGCA TTCATGGTGC GTTCGAAGAG
CGCCAGGACG CCGTGCTGAT TAACGCAGGC GCGTGGACGC ATTACAGCTA CGGCATCCGC
GATGCGCTGG CGATCCTGAC GTGTCCGGTG GTGGAATTGC ATATGTCCAA CATCCACGCA
CGCGAGCCGT TCCGACATCA CTTGGTATTT GCTGACATCG TCAGCGGGCA GATCTGCGGG
TTTGGCGTCC AGAGTTACCT TCTGGCCCTG CGGGCGGCGG CATCGGCAAT CGATCACGCT
TAG
 
Protein sequence
MFRATIRLQA LGAEPGVQVE SFQTNSEAAM CERIHGAFEE RQDAVLINAG AWTHYSYGIR 
DALAILTCPV VELHMSNIHA REPFRHHLVF ADIVSGQICG FGVQSYLLAL RAAASAIDHA