Gene Rpic_4096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4096 
Symbol 
ID6285472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp369390 
End bp370967 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content66% 
IMG OID642618585 
ProductABC transporter related 
Protein accessionYP_001892626 
Protein GI187926281 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGATC ACGTTGATCA ACCCGCCGCG ACAGATGCAC GCGGCGCGCT GCTGCACATG 
CGCGGCATCT GCAAGAACTT TCCCGGCGTG CAGGCGCTGG CCGCGGTCGA TTTCCGCTTG
TTTCCCGGAG AAGTGCACGC TCTGATGGGG CAGAACGGCG CCGGCAAGTC GACGCTCATC
AAGGTGCTGA CGGGCGTTGA AGCGCCCGAT GCGGGCGAGA TCGTGCTCGG CGGTCAGCCC
ATCGCGCCAA GCTCGCCGCT GGAGGCGCAA AAGCTCGGCA TCAGCACGGT GTACCAGGAG
GTCAATCTCT GCCCGAACCT GACCGTGGCG GAGAACATCC ACATCGGCCG CTTTCCCATG
CGCATGGGCA GCATCGACTG GCGGGCCACC AACCGGGCGG CGCAGGCGCT GCTGGCTGAT
CTGAACATCC ACATCGACGT GACGCTGCCG CTGTCGCTGT ATCCGGTGGC CATTCAGCAG
ATGGTGGCGA TTGCGCGCGC GCTTTCCACC GAAGCCCGCA TCCTGATCCT GGACGAGCCC
ACCTCCAGCC TGGACGATGA CGAAGTAGCC CGCCTGTTTG CCGCCATCCG CACACTCAAG
GCACGCGGCA TGGCCGTGCT GTTCGTCACG CATTTTCTGG AGCAGACCTA CGCGATTGCC
GACCGCATTA CCGTGCTGCG CAACGGCCGG CTGGAGGGCG AATATGCCGC GCGCGATCTG
CCGCAACTGC AACTGATCAA CAAGATGGTC GGGCGCGACA TCGATGCGAG CCGCTTCGAG
CGCACCGAGG TGCCATCCGT GGATGACACC GCGCCCGCAT TCCTGAGCGC GCGCGGCATG
GGCCGTCGTG GTGTCGTGCA ACCGCTCGAT CTGGACGTCC GCCCCGGGCA GGTGCTCGGC
CTTGGCGGCC TGCTCGGCTC AGGCCGAACG GAGACCGCGC GGCTGCTGTT CGGCGTTGAC
CGCAACGATG CGGGCTCGAT CAACGTGCAC GGGCAAGCGC GCCAGTTCAG CTCGCCGCGT
GATGCCATCC GCCAGGGCAT CGGCTTCTGC CCGGAAGACC GCAAGACCGA GGGCATCATC
GCCGAGCTGT CGATTCGCGA GAACATCATC CTCGCGCTTC AGGCCAAGCG CGGGCTGTTC
CGCTATCTGC CCAAGAAGCG CCAGCGCGAG ATTGCCGACC AGTACATCGC CCAGCTCGGC
ATCAAGACGC CCGACGCTGA AAAGCCGATC GGCCAACTCT CGGGCGGCAA CCAGCAGAAG
GCCGTGCTCG CGCGCTGGCT GGCGACCGAC CCGGCCATGC TGATCCTGGA CGAACCCACG
CGCGGCATCG ACATTGCCGC CAAGCTCGAC ATCATGGACC TGGTGACCGC GCAGTGCCGC
AAGGGCATGG CGATCCTGTT CATCTCCAGC GAGCTGCCGG AGGTGCTGCG CGTGAGCCAC
CGGCTGGCGA TCCTGCGCGA TCGCAAGAAG GTGGGCGAGC TGGCCGGCGC CGATGTGACG
GAAGACAACC TGTGCCACGT GATTGCCGGC GGCGACGTGC CCGCCAGCCA ATCCACCACC
ACCGGAGGCG CTGCATGA
 
Protein sequence
MSDHVDQPAA TDARGALLHM RGICKNFPGV QALAAVDFRL FPGEVHALMG QNGAGKSTLI 
KVLTGVEAPD AGEIVLGGQP IAPSSPLEAQ KLGISTVYQE VNLCPNLTVA ENIHIGRFPM
RMGSIDWRAT NRAAQALLAD LNIHIDVTLP LSLYPVAIQQ MVAIARALST EARILILDEP
TSSLDDDEVA RLFAAIRTLK ARGMAVLFVT HFLEQTYAIA DRITVLRNGR LEGEYAARDL
PQLQLINKMV GRDIDASRFE RTEVPSVDDT APAFLSARGM GRRGVVQPLD LDVRPGQVLG
LGGLLGSGRT ETARLLFGVD RNDAGSINVH GQARQFSSPR DAIRQGIGFC PEDRKTEGII
AELSIRENII LALQAKRGLF RYLPKKRQRE IADQYIAQLG IKTPDAEKPI GQLSGGNQQK
AVLARWLATD PAMLILDEPT RGIDIAAKLD IMDLVTAQCR KGMAILFISS ELPEVLRVSH
RLAILRDRKK VGELAGADVT EDNLCHVIAG GDVPASQSTT TGGAA