| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4091 |
|---|
| Symbol | |
|---|
| ID | 6285461 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010678 |
|---|
| Strand | - |
|---|
| Start bp | 364165 |
|---|
| End bp | 365124 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642618580 |
|---|
| Product | PBS lyase HEAT domain protein repeat-containing protein |
|---|
| Protein accession | YP_001892621 |
|---|
| Protein GI | 187926276 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1413] FOG: HEAT repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0472779 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACAA CACCCCTGGC GCGCCTGCAC GACGCGGATG CCGCCACCCG CCGCGTTGCC
CTGCTGCAGA TCGCCGATGA AGAAGACGCC GATTCGCTGC CAAACGTGAT TGCCCTGCTT
GAGCAAGACC CTGCCCCCGA AGTTCGGCTG GAAGCTGCGC GAATCCTCGC AACGTGGGAA
CAGCCGGATA CCGTGGCCGC ACTCGCCCGC GCGCTGGAAG ATGTGGATGG CGCCGTGCGT
GATGCCGCGG CAATCGGCCT GGCCGATTTG AAATCGCCCG AGTCTGCGTC CGCGCTGTTG
GCTTACGTCG ACCATGCCAG CGCCTTTGTA CGCGCCGCCG CATTGCGTGG GCTGCGTGAA
CTGCGCGTGC CCGAGAGCGA AGCACCCGCG CTGCACGCCT TGCAAGACGC CGACGCCGCC
GTGCGTCGCG AGGCCGTTGC GGTGCTCGGC TGGCGCAAGC ATGTGGGCGC ATTGCCTGCT
CTGGCGGAAC GCGCACGCCA TGACGCGGAT GTCGACGTGC GCCGTGCCGC AGTGGGCGCC
CTCGGCCTCG CCACCGATGC TGCCGTGCTG CCCGCGCTGC TCGCTGCGCT GCATGACACC
GCCTGGCGCG TGCGCGAGGA AAGCGCCAGC ACGCTCGGCA AACTGCGGGC GTTGGCTCCG
GACCTACATG TCACGCAGGC GTTGGTGGAT GCGCTGGCCG ATGCATATTG GCAGGTCCGT
CTACAGGCGG CCCGCGCGCT TGGCCGGTGG CGCGCCGCGC ATGCCGTCGA TGCGCTCGCT
GCGTTGCTCA CGCACCCAAT CAGCAACCTG CGCAAGGAGG CGGCACTCGC ACTGGGAGAG
ATCGGCGAAG CCTCTGCCCT GCCCGCCCTG CGCAGCGCAC AAACCGATGG CGACCCGGAA
GTCGTCAAGG CCGTGCGGAT CGCCTTGGCA CAAATCGAGC GCGCCCGTGC ATCCGCCTGA
|
|---|
| Protein sequence | MTTTPLARLH DADAATRRVA LLQIADEEDA DSLPNVIALL EQDPAPEVRL EAARILATWE
QPDTVAALAR ALEDVDGAVR DAAAIGLADL KSPESASALL AYVDHASAFV RAAALRGLRE
LRVPESEAPA LHALQDADAA VRREAVAVLG WRKHVGALPA LAERARHDAD VDVRRAAVGA
LGLATDAAVL PALLAALHDT AWRVREESAS TLGKLRALAP DLHVTQALVD ALADAYWQVR
LQAARALGRW RAAHAVDALA ALLTHPISNL RKEAALALGE IGEASALPAL RSAQTDGDPE
VVKAVRIALA QIERARASA
|
|---|
| |