Gene Rpic_4088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4088 
Symbol 
ID6285457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp362188 
End bp362751 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content66% 
IMG OID642618577 
ProductPEBP family protein 
Protein accessionYP_001892618 
Protein GI187926273 
COG category[R] General function prediction only 
COG ID[COG1881] Phospholipid-binding protein 
TIGRFAM ID[TIGR00481] Raf kinase inhibitor-like protein, YbhB/YbcL family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.138145 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGCCCA TCCTATTTCG CGCGTTGTTG TCGCTGGCGT GCCTGTCCGC TGTGCCGCAT 
GTGCATGCGC AGGCCGATAC CACGTTCACC GTCGAATCGC CTGCCTTTGC CGACAACGGC
GTCATGGACC GCAAGTACGC CGGCAAGAAC CCCGCCAACG CCAATTGCAC GGGCGACAAC
GTCTCGCCGC CGCTGCACTG GTCGAACGTG CCCGCGGGCA CCAACAGCCT TGTGCTGATC
GTCTCCGACC CGCAGGGCGC GGGCGGCCTG GGCGTGAACC ACTGGATGGC CTACGGTATG
CCGGCCACGC AGACGAGCCT GCCGGAAGGC GCCGGCACCG GCCCGGCGCT GCGCATGGGC
CAAAACTCCA TCGGCAAGCC GGCGTATCTC GGGCCGTGTC CGCCCAAGGG CACCGGCATG
CATCACTACG TATTTTTGCT GATCGCCACG GACCTGGCGC CGGATGCGCT GCCCAATGGG
CTGACCCGCG CTGAACTGGA TGCGGCCATC AAAGGGCATA GCAAAGGCGC CGCAGCCTGG
ATCGGCCGAT TCGGCAACTT TTGA
 
Protein sequence
MKPILFRALL SLACLSAVPH VHAQADTTFT VESPAFADNG VMDRKYAGKN PANANCTGDN 
VSPPLHWSNV PAGTNSLVLI VSDPQGAGGL GVNHWMAYGM PATQTSLPEG AGTGPALRMG
QNSIGKPAYL GPCPPKGTGM HHYVFLLIAT DLAPDALPNG LTRAELDAAI KGHSKGAAAW
IGRFGNF