| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4087 |
|---|
| Symbol | |
|---|
| ID | 6285455 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010678 |
|---|
| Strand | - |
|---|
| Start bp | 361450 |
|---|
| End bp | 362010 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642618576 |
|---|
| Product | protein of unknown function YGGT |
|---|
| Protein accession | YP_001892617 |
|---|
| Protein GI | 187926272 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.300525 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGGCG ATATCACGCG TTTTCTGCTC GACACGATCT TCTCGCTCTT TGGCGCGGCG
CTGCTCCTGC GCGCCTGGAC GCAAGCGGTG CGGCTGTCAC CGCGCAATCC GCTGTCACAG
GCCATCTTCC AGTTGACCGG CTGGCTGGTG CACCCGCTGC GCCGGGTGAT TCCGGCCACG
GGCTATATCG ACTGGTCATC GCTGGTGGCG GCTTATGCCA CGGCGCTTGT CTATCTCTTC
CTGCTGGTGG CGTCGGTGGG CGTGAGCCCG ATGGCACTCG TGCCAATGGG CTTTGTGGCC
GCGCTCTTCA CCGTGCTCAA ATGGGCGTTC AACGTGCTGG TGTGGGTGAC CATTGCATCG
GCCGTTCTAT CGTGGATGGG GCCGGCATCG CCAATGGGCG CGGTGCTCAA CACACTGGTC
GACCCGCTGT TGCGCCCGAT CCGCCGCGTG GTCCCTCCGC TGGGCGGGCG GCTCGACCTG
TCTCCGCTGA TCCTGCTGGT GATTGCGCAG GTGATCGTGA TCGCGCTGTC GCATCTGTCG
CTGTCACCGC TGTTCATGTG A
|
|---|
| Protein sequence | MFGDITRFLL DTIFSLFGAA LLLRAWTQAV RLSPRNPLSQ AIFQLTGWLV HPLRRVIPAT
GYIDWSSLVA AYATALVYLF LLVASVGVSP MALVPMGFVA ALFTVLKWAF NVLVWVTIAS
AVLSWMGPAS PMGAVLNTLV DPLLRPIRRV VPPLGGRLDL SPLILLVIAQ VIVIALSHLS
LSPLFM
|
|---|
| |