Gene Rpic_4081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4081 
Symbol 
ID6285445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp355694 
End bp356710 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content67% 
IMG OID642618570 
Producttranscriptional regulator, LacI family 
Protein accessionYP_001892611 
Protein GI187926266 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCG GCACCACTCC TCCTCGCATG GCCGATGTTG CGCGCGTTGC CGGCGTGTCG 
AAGATGACCG TGTCGCGGGT GCTGGCAGGC GGCAGCGTGT CGCCCGAGAC CCGCGCGCGC
GTGCAAGAGG CCATCGATGC ACTCGGCTAC GTTGCTACGG CTGCGGCTGG AATGCTGTCC
AGCGGCCGAT CGGAATTCGT CGCCGCCCTG GTGCCTTCGC TGGCGAGTTC CAACTTTGCC
GATACCGTGC GCGGACTGAG CGATGCGCTG GCGCCGCATG GTCTGCAACT GCTCCTGGGC
GATACCGACT ACCACCTCGA TCAGGAGGAG GCGCTGGTGC GGTCGCTGCT GCGCCATCAG
CCGCGTGGCA TTGCCTTGAC CGGGCGCCAT CACAGTCCAG GCACGCGTGC GTTGCTGGAG
CGCGCCGGCA TCCCCATCGT CGAGATGTGG GATCTGCCTG AGCGCCCGAT CGATCGCGCG
GTCGGGTTCT CGAACGCCAA GGCGTCGCTC GCGATGCTGC ATCACCTGCA TCAGCGGGGC
TACCGGCGCA TTGGTTTCCT GTGCGGGGCA AGCGAACTGG ACCGGCGCGG CACCGACCGC
ATGCGCGGGT ACATGAGCGG AATCAAGTCG CTTGGCCTTG GCGAGCCGCG TGTGATCCGC
CTGGGCGAGT CGCCCATCAC CATGAGCCAC GGCGGCCCGG CGATGGCCGC GTTGCTCGAT
GCCTGGCCCG ACACCGATGC CGTGATGTGC GTGAGCGACA TGTCCGCATT CGGCGCCATC
ATGGAATGCC ACCGGCGCGG TCTGTCCGTG CCCGGTGACA TTGCTGTTGG GGGCTTCGGC
AATTTTGAAG TCGCGTGGTG CTGCCACCCG ACCATCACGA CGATTTCCGT CGACGCCTAT
GGCATCGGCC TGCGCACGGG CGAGGTCTTG CTCGATGCGC TCGGCGTTGG CGAGGCCACG
AGCACCCGCA AGCTCTCACG CATCGACTTC AGCGTTGTCG AGCGCGAGAG CGCATAG
 
Protein sequence
MTTGTTPPRM ADVARVAGVS KMTVSRVLAG GSVSPETRAR VQEAIDALGY VATAAAGMLS 
SGRSEFVAAL VPSLASSNFA DTVRGLSDAL APHGLQLLLG DTDYHLDQEE ALVRSLLRHQ
PRGIALTGRH HSPGTRALLE RAGIPIVEMW DLPERPIDRA VGFSNAKASL AMLHHLHQRG
YRRIGFLCGA SELDRRGTDR MRGYMSGIKS LGLGEPRVIR LGESPITMSH GGPAMAALLD
AWPDTDAVMC VSDMSAFGAI MECHRRGLSV PGDIAVGGFG NFEVAWCCHP TITTISVDAY
GIGLRTGEVL LDALGVGEAT STRKLSRIDF SVVERESA