Gene Rpic_4080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4080 
Symbol 
ID6285442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp354849 
End bp355604 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content66% 
IMG OID642618569 
Producttranscriptional regulator, IclR family 
Protein accessionYP_001892610 
Protein GI187926265 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.361384 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGACAG ACTACGAGGT GCCAGCACTC AAGCGCATTC ATGACGTGCT GGAAATACTC 
TGCGCGGCGA CGTCTCCCGT CCGGCCGGCC GCATTGGCGC AGGCGACGGG CATGTCCAGA
AGCACGTTGT ACCTGCTGCT GGAGTCGCTC GAAAAGCGTC GCTGGATCGA GAAGCAGGCA
GACGGCTATC TGATCGGCTT GACCCTGTTT GAGTTGGGCA ACGCTTACTT CCGCCACGAC
AGCTTATTGG CAGCGTTCCG GCGCGAATCC GCCGCCTTCG TGGCCGCACA CAATGAAGTC
GTGCAACTGG CTGTGCTCGA CGGTACGGAG GTCGTCTACA TCGCGCGGGA AGACGCGCCG
AGGCCGGTCC GCCTGGTATC GGATGTCGGC CTGCGCCTGC CGGCCCATTG TTGTGCGCTG
GGCAAGGCGC TGCTCGCAAG CCTTGACGAT GAAGCGGTGC GCGCGCTCCT GCCGGCTCGT
CTTGCCGCCA TGACGGAGCG CACCACCACG CGCCGCGCCG ATTTGCTCGA CGAGCTTGAG
CGCATTCGCG TGCGGGGGCT GGCGACAGAG CGTGAGGAGG TGGTGGCGGG GCTCGCCTGC
TTCGCGGCGT TTGTGGGCAT CACGCCGCTA GGGAAACGCG TTGCGGTGAG TTCGAGCGTG
CCCGTCAGCC GACTGGACGC CCGCAGGGAG AAACGCCTCG TCGTCGGTGT TGCGGGGATG
GCGGACCGCA TCGGCCGCGC GCTCGCGCAG GCATAG
 
Protein sequence
MKTDYEVPAL KRIHDVLEIL CAATSPVRPA ALAQATGMSR STLYLLLESL EKRRWIEKQA 
DGYLIGLTLF ELGNAYFRHD SLLAAFRRES AAFVAAHNEV VQLAVLDGTE VVYIAREDAP
RPVRLVSDVG LRLPAHCCAL GKALLASLDD EAVRALLPAR LAAMTERTTT RRADLLDELE
RIRVRGLATE REEVVAGLAC FAAFVGITPL GKRVAVSSSV PVSRLDARRE KRLVVGVAGM
ADRIGRALAQ A