Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4080 |
Symbol | |
ID | 6285442 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | + |
Start bp | 354849 |
End bp | 355604 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642618569 |
Product | transcriptional regulator, IclR family |
Protein accession | YP_001892610 |
Protein GI | 187926265 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.361384 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGACAG ACTACGAGGT GCCAGCACTC AAGCGCATTC ATGACGTGCT GGAAATACTC TGCGCGGCGA CGTCTCCCGT CCGGCCGGCC GCATTGGCGC AGGCGACGGG CATGTCCAGA AGCACGTTGT ACCTGCTGCT GGAGTCGCTC GAAAAGCGTC GCTGGATCGA GAAGCAGGCA GACGGCTATC TGATCGGCTT GACCCTGTTT GAGTTGGGCA ACGCTTACTT CCGCCACGAC AGCTTATTGG CAGCGTTCCG GCGCGAATCC GCCGCCTTCG TGGCCGCACA CAATGAAGTC GTGCAACTGG CTGTGCTCGA CGGTACGGAG GTCGTCTACA TCGCGCGGGA AGACGCGCCG AGGCCGGTCC GCCTGGTATC GGATGTCGGC CTGCGCCTGC CGGCCCATTG TTGTGCGCTG GGCAAGGCGC TGCTCGCAAG CCTTGACGAT GAAGCGGTGC GCGCGCTCCT GCCGGCTCGT CTTGCCGCCA TGACGGAGCG CACCACCACG CGCCGCGCCG ATTTGCTCGA CGAGCTTGAG CGCATTCGCG TGCGGGGGCT GGCGACAGAG CGTGAGGAGG TGGTGGCGGG GCTCGCCTGC TTCGCGGCGT TTGTGGGCAT CACGCCGCTA GGGAAACGCG TTGCGGTGAG TTCGAGCGTG CCCGTCAGCC GACTGGACGC CCGCAGGGAG AAACGCCTCG TCGTCGGTGT TGCGGGGATG GCGGACCGCA TCGGCCGCGC GCTCGCGCAG GCATAG
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Protein sequence | MKTDYEVPAL KRIHDVLEIL CAATSPVRPA ALAQATGMSR STLYLLLESL EKRRWIEKQA DGYLIGLTLF ELGNAYFRHD SLLAAFRRES AAFVAAHNEV VQLAVLDGTE VVYIAREDAP RPVRLVSDVG LRLPAHCCAL GKALLASLDD EAVRALLPAR LAAMTERTTT RRADLLDELE RIRVRGLATE REEVVAGLAC FAAFVGITPL GKRVAVSSSV PVSRLDARRE KRLVVGVAGM ADRIGRALAQ A
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