Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4076 |
Symbol | |
ID | 6285435 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | + |
Start bp | 350616 |
End bp | 351818 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642618565 |
Product | Monosaccharide-transporting ATPase |
Protein accession | YP_001892606 |
Protein GI | 187926261 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4214] ABC-type xylose transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.784913 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCTC AAACAAGCCC TCAAGCCGCA GGCGGGGTGG ACCATTCGCG CAGCACAATC AAAGCAACGC AGCGCTTGCG GCAACTCTTT GCCCGCTACA AGATCCTGGC CTTGCTGATC GCCGTGGCGG CAATCTGGCT GTTCTTTTCG ATGCTGACCG ACGGTGCGTT TACGTCGCCG CGCAATCTCT CCAATCTGCT GCGGCAGATG TCGATTACGG GGATGCTGGC CTGCGGGATG GTCTTCGTCA TCATCGCGGG CGAGATCGAT CTTTCGGTCG GTTCGTTGCT TGGCTTGCTC GGTGGCGTGG CGGCCATCCT GGATCAAGGA CTGGGCTGGC CGATCACGGC GACGGTGCCC GTGGTGCTGC TGCTCGGCGT GGCCATGGGC CTGTTCAACG GATGGTGGTC GACCTACCGG GGCGTGCCGT CCTTCATCGT CGGCCTGGGC GGCATGCTGG CGTATCGCGG CATCCTGCTC GGCCTGACGC ATGGCTCGAC GATTGCGCCG GTGTCGGACA GCTTCGTGCT GATCGGCCAA GGTTACTTGC CGCGCCATGT GGGCGACCTC ATGGCGGTGC TGATCTTCTG CCTGTTGATC TTCGTGGTGG CGAGGCAGCG GCGTGAACAT CGCCGCTATG AACTCGACGT CGCGCCGCTC TGGCAGGACG TCGCCAAGCT TGTTGTGGCG GGCGCGGTCA TCGTCGCCTT TGTCGCCACG CTCAACAGCT ATGGCGGCAT TCCGGTGCCT GTTCTGCTCG TGCTGGCGTT GCTCGGTATT TTTTCTTGGA TCGCCAGCCA GACGGTTTTC GGCCGCCGTA TCTACTCCGT GGGTTCAAAC CTTGAAGCCA CACGCCTGTC GGGCATTAAC ACCGATCGCG TGAAGCTTGC CATTTTCGGG CTCATGGGCT TGATGTGCGC GTTTGCCGGC ATCGTCAATA CGGCGCGTCT GGCGGCGGGC TCGCCGTCCG CCGGAACCAT GGGCGAACTG GATGCCATTG CGGCCTGCTT CATCGGCGGC ACGTCCATGC GCGGCGGCGC GGGTACGGTC TACGGCGCGC TGGTCGGTGC GCTGGTCATG GCGAGCCTCG ACAACGGCAT GTCCATGCTC GACGTGGACG CGTACTGGCA GATGATCGTC AAGGGCAGCA TCCTCGTGCT GGCCGTCTGG GTGGACGTCA TCTCGCGCTC CGGCCGCCGC TGA
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Protein sequence | MTSQTSPQAA GGVDHSRSTI KATQRLRQLF ARYKILALLI AVAAIWLFFS MLTDGAFTSP RNLSNLLRQM SITGMLACGM VFVIIAGEID LSVGSLLGLL GGVAAILDQG LGWPITATVP VVLLLGVAMG LFNGWWSTYR GVPSFIVGLG GMLAYRGILL GLTHGSTIAP VSDSFVLIGQ GYLPRHVGDL MAVLIFCLLI FVVARQRREH RRYELDVAPL WQDVAKLVVA GAVIVAFVAT LNSYGGIPVP VLLVLALLGI FSWIASQTVF GRRIYSVGSN LEATRLSGIN TDRVKLAIFG LMGLMCAFAG IVNTARLAAG SPSAGTMGEL DAIAACFIGG TSMRGGAGTV YGALVGALVM ASLDNGMSML DVDAYWQMIV KGSILVLAVW VDVISRSGRR
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