| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4075 |
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| Symbol | |
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| ID | 6285434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | + |
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| Start bp | 349060 |
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| End bp | 350613 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642618564 |
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| Product | xylose transporter ATP-binding subunit |
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| Protein accession | YP_001892605 |
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| Protein GI | 187926260 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | [TIGR02633] D-xylose ABC transporter, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.818661 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAAC CTCTGTTGCA GATGCGCGGC ATCGTCAAGA CGTTCGACGG TGTGAAGGCG
CTTGACGGTA TCAACCTGGT CGTGAGGCCA AGCGAGTGTG TTGGCCTGTG CGGCGAGAAC
GGCGCCGGAA AATCCACGCT CATGAAGGTG CTCTCCGGTG TGTACCCGAG CGGCACCTGG
GATGGCGAAA TCCTCTGGGA GGGGCAGCCA CTGCGCGCCG GCGGTATTTG CGACACCGAG
CGCGCGGGTA TCGTCATCAT TCATCAGGAA CTGATGCTGG TGCCGGAATT GTCGGTGGCG
GAGAACATCT ATCTTGGCAA CGAAATCACG CTGCCAGGCG GCCGCATGAA TTACGCGGCC
ATGTACCAGG GCGCCGACAA GCTGCTGCGC GACCTGAACA TCCAGGGCAT CAACGTGGCG
TTGCCCGTGA TGCACTACGG CGGCGGCCAT CAGCAGCTGA TTGAAATTGC CAAGGCGCTT
AACAAGCGCG CCAAGCTGCT GATCCTGGAT GAGCCGTCGT CATCGCTCAC GGCGGCGGAG
ACGCGCATCC TGCTCGACAT CGTGCGCGAC CTGAAAGCGC GCGGCATTGC GTGCGTCTAC
ATCTCGCACA AGCTCGACGA GGTGGAGGCG GTGTGCGACA CCGTGACCGT CATCCGCGAT
GGCCGCCATG TGTCGACCGC GCCGATGCGT GATCTGACTA CCGACCGCAT CGTCGCGCAG
ATGGTCGGGC GCGAAATTAC GCAACTGTTT CCGCGCGAGC CGCATCCCAT CGGCGAGGTG
GTGTTCGAGG CACGCAACGT GACGTGCTAC GACGCCAACA ACCCGACTCG CAAGCGGGTC
GACGATGTGT CCTTCGCGGT GCGGCGTGGC GAAATTCTCG GCGTGGCGGG ATTGGTTGGG
GCAGGGCGCA CCGAGCTGAT GCAGGCGGTG TTTGGCGCGT ACGAAGGTGC CAGTGAGGTG
GAGCTGGTGC TGGACGGAAA GCCGCTGAAA ATCCGCGCGC CGCTAGACGC CATTCGTGCG
GGCATTGCGA TGGTGCCGGA AGACCGCAAG CGTCACGGCA TCGTTTCGCT GATGAGCGTG
GGGCACAACA TCACGCTGGC CGTCCTGCAG CGTTTCGCGC GTCTTGGGCG CATTGACGGC
GCGGCCGAAC TCGACACGAT CCGCAAAGAG ATGCGCCGGC TTGCCGTGCG TGCGGCGCAT
CCGATGCTAC CCATTGCCAG CCTGTCGGGC GGCAATCAGC AAAAGGCCGT TCTGACGCGA
ATGCTGCTGA CCGAGCCGCG CGTCCTGATT CTGGACGAGC CGACGCGCGG CGTGGACGTC
GGCGCCAAAT ACGAGATCTA CAAGCTGATC GGTGATCTCG CCAAGCGCGG CATGGCCATC
ATCGTGATCT CGTCGGAGCT GCCCGAAGTG CTTGGCATTT CGGACCGCGT GCTCGTGATC
GGCGAGGGCG AACTGCGCGG CGACTTCGTG AACGACGGCT TGACGCAGGA ACACATTCTG
ACCGCAGCCA TTCAACCGGT GCGGCACACA TCCACTTTTC ATCGGGGTGG CTAG
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| Protein sequence | MSEPLLQMRG IVKTFDGVKA LDGINLVVRP SECVGLCGEN GAGKSTLMKV LSGVYPSGTW
DGEILWEGQP LRAGGICDTE RAGIVIIHQE LMLVPELSVA ENIYLGNEIT LPGGRMNYAA
MYQGADKLLR DLNIQGINVA LPVMHYGGGH QQLIEIAKAL NKRAKLLILD EPSSSLTAAE
TRILLDIVRD LKARGIACVY ISHKLDEVEA VCDTVTVIRD GRHVSTAPMR DLTTDRIVAQ
MVGREITQLF PREPHPIGEV VFEARNVTCY DANNPTRKRV DDVSFAVRRG EILGVAGLVG
AGRTELMQAV FGAYEGASEV ELVLDGKPLK IRAPLDAIRA GIAMVPEDRK RHGIVSLMSV
GHNITLAVLQ RFARLGRIDG AAELDTIRKE MRRLAVRAAH PMLPIASLSG GNQQKAVLTR
MLLTEPRVLI LDEPTRGVDV GAKYEIYKLI GDLAKRGMAI IVISSELPEV LGISDRVLVI
GEGELRGDFV NDGLTQEHIL TAAIQPVRHT STFHRGG
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