Gene Rpic_4072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4072 
Symbol 
ID6285424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp345378 
End bp346460 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content65% 
IMG OID642618561 
ProductAldose 1-epimerase 
Protein accessionYP_001892602 
Protein GI187926257 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2017] Galactose mutarotase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATCG CGCCAGCGCT GTCCGCACAC GCGCCGCTCG ACGGCGCCAT CTCGTCAGCA 
ACATGGGGGC ACTTGCCCGA CGGTGAGCCG GTTCGGCTGT TCACGCTGCG CAATGCCTCG
GACATGCGCG TTTCGATCAG CGACCTCGGG GCGACGCTCG TCTCCTGGCA AGCGCCGGAT
CGCGGCGGGC GCCTGGGCGA GATTCTGCTC AACCACGCGA CGCCTGCCGC CTACCTTCAA
TCGGGGGGCT ACCTTGGGGG CTTGATCGGG CGCTGGGCCA ACCGGATTGC CGGCGCACGC
TTTACGCTCG ACGGCATCGA CTACGCGCTC GACCGCAATG AGGACAGCAA TCTGCTGCAT
GGAGGGGCAA GCGGATTTCA TCGAGCGCTA TGGGACGCCG AAGAGCAGGA CGGCGCTTTG
GTCCTGAGGC TCATGTCTGC GGAAGGCGAT GCGGGGTTCC CGGGCAATGT CGCCGTCCAG
GTTCGCTATG CGCTTGACGA CGACGGCACG CTGTCAATCG ACTACGAGGC CCGCACCGAT
GCGCCCACGC CAATCAACCT GACCAGCCAC GGATATTTCA ACCTCAGCGG AAAGCCCGGC
ACTGACATCA GGGGCCACAT CCTGTCGATC GATGCCGATG CCTACCTGGA AGTCGATGCC
AAGTTGATCC CGACGCGGGC AGTGAGTGTC GCCGGCACGG CATTCGATTT TCGGCAGGCG
GCGCCCATCG GGGTACGGCT GGACTGGCCT AACGCGCAGT TGGCGCAGGC CGGCGGGTTC
GACCACTGCT TCATGCTGCG TAACACGGTG CCGGACGATC ACCCGCATGT GCGTCCGGTC
GCGCGTCTGT ATGAACCCGG CAGCGGCCGC GAATTGACAG TGCTCACAGA CCAGCGCGGG
CTTCAGTTCT ACTCGGGCCA CATGCTGTCG GGCACGCACG CGCAACGCAG CGGCTTATGT
CTGGAAGCGA GTGCGTTTCC GAACCAGGTC AACATGCCCG ATGCGGAGGC GGTCATGCTG
CGCCCGGGCC AGGTCTATCG GCAGCGCACT GCATACCGCG TCTCGGTTGC CAGAGAAACC
TGA
 
Protein sequence
MSIAPALSAH APLDGAISSA TWGHLPDGEP VRLFTLRNAS DMRVSISDLG ATLVSWQAPD 
RGGRLGEILL NHATPAAYLQ SGGYLGGLIG RWANRIAGAR FTLDGIDYAL DRNEDSNLLH
GGASGFHRAL WDAEEQDGAL VLRLMSAEGD AGFPGNVAVQ VRYALDDDGT LSIDYEARTD
APTPINLTSH GYFNLSGKPG TDIRGHILSI DADAYLEVDA KLIPTRAVSV AGTAFDFRQA
APIGVRLDWP NAQLAQAGGF DHCFMLRNTV PDDHPHVRPV ARLYEPGSGR ELTVLTDQRG
LQFYSGHMLS GTHAQRSGLC LEASAFPNQV NMPDAEAVML RPGQVYRQRT AYRVSVARET