Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4057 |
Symbol | |
ID | 6285393 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 325778 |
End bp | 326818 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642618546 |
Product | ApbE family lipoprotein |
Protein accession | YP_001892587 |
Protein GI | 187926242 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.807087 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATCCGC TGCCCCCTTC CAACCTGGGC CGCCGGCGCT GCCTGGCGGG GGTGCCCCTG CTGGCAGTCG GCATGTTCGT ACGGCCGGCC CTGGCAGACC CCACTGTGGA GCGCGCATCC ACTCAATTGC TGGGCACTCA AATCGACATC ATTGCGCAAG ACGCGAGACC GGGCGCCGCC GGTGCGGCCA TGCGCGCTGC CTTTGTGGAG ATGGCGCGGC TCGAATGCTT GATGAGCCGC TACCGGCCCG ACAGCCAGGT CAGCGCACTG GCACGCGCGG CGGGGCGGAA CCCCGTGCCG GTGGCACCTG AAGTCATGTC GGTGTTCAAG CTTGCCCGAC AGGTCTCGGA GCAAAGCCGC GGCGCCTTCG ATATCACCGT CGGCGCGTAC TCCGGCTGGA ATTTTGATCC GGAGCACAGC CGCATTCCGA GCAGCAGCGA ACTGGCGCGT GAGCGCCGCT TCGTCAACTA TCGAGACGTC GTTCTGGACG AGCGCCACGG CAGCGTCTAC TTGCGACGCC CGGGGATGAG GCTGGATCTT GGCGGCATTG CCAAGCTGCC GATCCTGGAG GCAGGCATGC GCGTGCTACG GCAACACGGC ATACGCGATG CCATGATCAA CGGTGGAGGC GATGTGGTGG CCAGCGGGAA GCTGCAAGGT CACGAATGGC GCGTCGGACT GCGCGATCCG CTTGCGCCGG AGCGACTGCT GGGCGTGGTC ACGCTCAGTG ACGGGGTTGT GGCGTCATCC GGAGACTACG AGCGTTACTT CATGCACAAC GGTCAGCGCT TTCATCACGT TCTCGATCCG GAAACGGGTC TGCCTGCGCA TGGGCCCCAT GGCGTAACCC TGGTCAGTCG CGACGTTGAC GACGTCAACG GCCTTGGCGC GGCAATCATG GCAGCGGGCA CCGCCACCGG GCAGCGGATG CTTGCACCGA TGCTCGCACG CGTGGATGCC CTGATCGTAG GTTCTGGAGT TCGGCCATGG ATGTCGGCCG GAATGGCAAC GCGCTTGCGG CAGTTCTCTG CAAGCAGTTG A
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Protein sequence | MHPLPPSNLG RRRCLAGVPL LAVGMFVRPA LADPTVERAS TQLLGTQIDI IAQDARPGAA GAAMRAAFVE MARLECLMSR YRPDSQVSAL ARAAGRNPVP VAPEVMSVFK LARQVSEQSR GAFDITVGAY SGWNFDPEHS RIPSSSELAR ERRFVNYRDV VLDERHGSVY LRRPGMRLDL GGIAKLPILE AGMRVLRQHG IRDAMINGGG DVVASGKLQG HEWRVGLRDP LAPERLLGVV TLSDGVVASS GDYERYFMHN GQRFHHVLDP ETGLPAHGPH GVTLVSRDVD DVNGLGAAIM AAGTATGQRM LAPMLARVDA LIVGSGVRPW MSAGMATRLR QFSASS
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