| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4015 |
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| Symbol | |
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| ID | 6285310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | + |
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| Start bp | 284137 |
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| End bp | 285636 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642618505 |
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| Product | nitrite reductase, copper-containing |
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| Protein accession | YP_001892546 |
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| Protein GI | 187926201 |
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| COG category | [C] Energy production and conversion
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2010] Cytochrome c, mono- and diheme variants
[COG2132] Putative multicopper oxidases |
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| TIGRFAM ID | [TIGR02376] nitrite reductase, copper-containing |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGTC TTCACACCGT CCGCAGCCTG ATGCGCGCGG GCTTGATTTC TGTGGTGCTG
GGCGCACTGC TTGCGGGCAC TGCGGCCCGC GCCGCCAGCG CCAAGTTGCC GGGTGACTTC
GGGCCGCCAC GCGGCGAGCC GATCCACGCC GTCCTGACGA GTCCACCGCT TGTGCCGCCG
CCGGTGCACC GGAACTATCC AGCCAAGGTC ATCGTGGAGC TGGAAGTGGT CGAGAAGGAA
ATGCAGATCT CCGAAGGGGT CAGCTACACC TTCTGGACGT TCGGCGGCAC CGTTCCTGGA
AGTTTCATCC GCGTGCGGCA GGGCGACACG GTGGAGTTCC ACCTCAAGAA CCACCCAAGC
AGCAAGATGC CGCACAACAT CGACCTGCAC GGCGTGACCG GGCCGGGCGG CGGCGCAGCA
TCGAGCTTTA CCGCCCCGGG CCATGAATCG CAGTTCACCT TCAAGGCGCT GAACGAGGGC
ATTTACGTTT ACCACTGCGC TACCGCACCC GTGGGCATGC ATATCGCCAA CGGCATGTAC
GGCCTGATCC TGGTCGAACC GCCCGAAGGC CTGCCCAAGG TTGATCACGA GTACTACGTC
ATGCAGGGCG ATTTCTACAC CGCCGGCAAG TACCGCGAGA AGGGCCTGCA GCCGTTCGAC
ATGGAAAAGG CCATCGACGA ACGCCCGAGC TACGTGCTGT TCAACGGTGC GGAAGGCGCG
CTCACCGGTG ACAAGGCGCT GCACGCCAAG GTGGGCGAAA CGGTGCGCAT CTTCGTGGGC
AACGGCGGGC CCAATCTGGT CTCCAGCTTC CACGTGATCG GCGCCATCTT CGATCAGGTG
CGCTACGAGG GCGGCACCAA CGTGCAGAAG AACGTGCAGA CCACGTTGAT CCCGGCGGGT
GGCGCGGCGG TTGTGAAGTT CACCGCGCGC GTGCCTGGCA GCTATGTGCT GGTCGACCAC
TCGATCTTCC GTGCCTTCAA CAAGGGTGCG CTGGCCATCC TCAAGATCGA TGGGCCGGAG
AGCAAGCTGG TCTATTCCGG CAAGGAACTG GATTCGGTGT ACCTGGGCGA TCGTGCCGCG
CCCAACATGA GCGCCGTCAC CAAGGCGACC GAGGCGTCGG TGAGCGGCAC GCTGACCGTG
CAGGATCAGG TGCAGGCAGG CCGCGCGCTG TTTGCGGGTA CCTGCTCGGT GTGCCACCAG
GGCAATGGCG CCGGCTTGCC GGGCGTGTTC CCGCCGCTTG CCAAGTCGGA TTTCCTGGCG
GCAGATCCGA AGCGCGCCAT GAACATCGTG CTGCATGGCC TGAACGGCAA GATCAAGGTC
AATGGCCAGG AATACGACTC CGTCATGCCG CCGATGACAC AACTCAATGA CGACGAGGTC
GCCAACATCC TGACCTACGT GCTCAACAGC TGGGACAACC CCGGCGGCCG CGTGAGCGCA
GAAGACGTCA AGAAGGTGCG TGCCCAGCCG GCGCCCGCCA AGGCCGTGGC CGAACATTGA
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| Protein sequence | MSRLHTVRSL MRAGLISVVL GALLAGTAAR AASAKLPGDF GPPRGEPIHA VLTSPPLVPP
PVHRNYPAKV IVELEVVEKE MQISEGVSYT FWTFGGTVPG SFIRVRQGDT VEFHLKNHPS
SKMPHNIDLH GVTGPGGGAA SSFTAPGHES QFTFKALNEG IYVYHCATAP VGMHIANGMY
GLILVEPPEG LPKVDHEYYV MQGDFYTAGK YREKGLQPFD MEKAIDERPS YVLFNGAEGA
LTGDKALHAK VGETVRIFVG NGGPNLVSSF HVIGAIFDQV RYEGGTNVQK NVQTTLIPAG
GAAVVKFTAR VPGSYVLVDH SIFRAFNKGA LAILKIDGPE SKLVYSGKEL DSVYLGDRAA
PNMSAVTKAT EASVSGTLTV QDQVQAGRAL FAGTCSVCHQ GNGAGLPGVF PPLAKSDFLA
ADPKRAMNIV LHGLNGKIKV NGQEYDSVMP PMTQLNDDEV ANILTYVLNS WDNPGGRVSA
EDVKKVRAQP APAKAVAEH
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