Gene Rpic_4011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4011 
Symbol 
ID6285303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp279544 
End bp280338 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content65% 
IMG OID642618501 
ProductABC transporter related 
Protein accessionYP_001892542 
Protein GI187926197 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.38128 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGCCA ACTCACCAAC GGCACCGCCG CTGCTGGACG TGCGCGGCGT CACGCTGCAG 
TACAAGACAC GCCAGCATCT GGTGACGGCC ACCTACCGCG TCGATTTCCA GGTCTACCCC
GGCGAGCGCT ATATCCTGCT TGGGCCGTCG GGCTGCGGTA AATCGACACT GCTCAAGGCC
ATCGGCGGCT ACCTCACACC CACCGAGGGC GAGATCCGTC TCAAGGGCCA GCCCGTGACG
AAGCCGGGGC CGGATCGCAT GATGGTGTTC CAGGAGTTCG ACCAGCTCCT GCCGTGGAAG
ACCGTGAAGG AAAACGTGCT GTTCCCGCTG CTCTCCACGG GCAAGCTGGG CGCGCGTGAA
GCCGAAGAGC GCGCGCTGCA CTACATCAAC AAGGTCAACC TCACGAAGTT TGCCGACCAC
CACCCGCACA TGCTGTCTGG GGGGATGAAG CAGCGTGTGG CGATTGCGCG CGGCATGGCC
ATGGAGCCCG ACGTGCTGCT GATGGACGAG CCCTTCGCCG CGCTCGATGC GCTCACGCGC
CGCAAGATGC AGGACGAGTT GCTGCAGCTG TGGGACGAAA CGCGCTTCAC CGTGCTGTTC
GTCACGCACT CGATTCCGGA GGCGATCCGC TGCGGCAGCC GCATCCTGAT CCTGTCGCCG
CATCCCGGCC AGGTACGCGC CGAACTGCCG AGCCTTGCGC GCGGCGATGA TGACCCGGAG
CGCTTCAAAG CCCTCGAAGC CGAGATCCAC GACATGCTGT TCGCCCGCGC GGTGGAGGAA
ACCCATGCAG ACTGA
 
Protein sequence
MQANSPTAPP LLDVRGVTLQ YKTRQHLVTA TYRVDFQVYP GERYILLGPS GCGKSTLLKA 
IGGYLTPTEG EIRLKGQPVT KPGPDRMMVF QEFDQLLPWK TVKENVLFPL LSTGKLGARE
AEERALHYIN KVNLTKFADH HPHMLSGGMK QRVAIARGMA MEPDVLLMDE PFAALDALTR
RKMQDELLQL WDETRFTVLF VTHSIPEAIR CGSRILILSP HPGQVRAELP SLARGDDDPE
RFKALEAEIH DMLFARAVEE THAD