Gene Rpic_3999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3999 
Symbol 
ID6285281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp270729 
End bp271370 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content66% 
IMG OID642618490 
ProductYheO domain protein 
Protein accessionYP_001892531 
Protein GI187926186 
COG category[S] Function unknown 
COG ID[COG2964] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCCA CTGAAGAAAA CCGCCTTCTG CTGCGCGAAG GCCGAAAGAT CGTCGAGGCG 
CTGGGCAAGA CGCTGGCGCC GCTGGTGGAA GTCGTCCTGC ACGACCTGAC CGATCCCGAT
CATGCCGTCG TCGCCATCGC CAACAACCTG TCCGGCCGCC AGGTGGGCGA CGCCGTGACG
GAACTGGGAC TCGCGCGCCT GGCCGACCCC GACTTCCCGG AAGTCATCGA GAACTACGCC
AACCGGTTTC CCGACGGGCG CCCGGCCAAG AGCACATCGA TCGGGCTGAA GAACAGCCGC
GGCGATTACG TGGCGGCCAT CTGCCTGAAC ATGGATGTCT CCATGCTGCA TGCCGTGACC
ACCGGCCTCA CGCAACTGAT GCGCGTTGAT GCGGCTGCGC CGCCAGTGCC CGAGTCGCTT
GGCTCCCGTC GCGTGGAAGA CGTGCGCATC GCGCTCGAAC AGTTTGCTGC CGCCCGCAAC
ACCACACCCA TGGCCATGAC CCTCGACCAG CGCCGCGAGG CTATGCGCGA ACTGGCCGTC
AGTGGCCTGC TGAACTTGCG CCGCGCGCTG ACCGAAGTCG CCCAGACACT CGGCGTGGCG
CGCTCCACCG TCTACACCTA TCTTCCCGAG GATCTCGCAT GA
 
Protein sequence
MKPTEENRLL LREGRKIVEA LGKTLAPLVE VVLHDLTDPD HAVVAIANNL SGRQVGDAVT 
ELGLARLADP DFPEVIENYA NRFPDGRPAK STSIGLKNSR GDYVAAICLN MDVSMLHAVT
TGLTQLMRVD AAAPPVPESL GSRRVEDVRI ALEQFAAARN TTPMAMTLDQ RREAMRELAV
SGLLNLRRAL TEVAQTLGVA RSTVYTYLPE DLA