| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3998 |
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| Symbol | |
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| ID | 6285280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | + |
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| Start bp | 269671 |
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| End bp | 270432 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642618489 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001892530 |
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| Protein GI | 187926185 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGCT TCGAAGGCAA GACCGTTCTG GTCACTGGCG GCAACAGCGG TATTGGCCTG
GCAGCCGCCC AGGCATTTGC GCGGGAAGGC GCCCGTGTGG TCATCACCGG CCGCGATGCG
GCAGCGCTGG AAACGGCGCG CGCCACGCTG GGCACGGCCG GCGGCAATGC GGCCCTCGCC
ATCCGTAACG AAACCGGCAC CGTGGCAGCC GCGCGCGAGC TGACCCGCCA GCTGCAGGAG
GCCGGCGTGC GTCTGGACGC TGTGTTCATT AACGCCGGCA TGGCCAAGTT TGCCGCCGTC
CCGGACGTGG AAGAAGCCCT GTGGGATGCG ACCTTCAACG CCAACGTGAA GGGCGCGTTC
TTCCAGATGC AGGCGCTGCT GCCCATCCTC AACAAGGGCA CGTCGATCGT GCTGAACGGC
TCCATCAACG CGCACATCGG CATGCCGAAT TCGTCGGTCT ATGCGGCAAG CAAGGCTGCG
CTGATCTCGC TGGCGAAGAC GCTGTCGGGT GAGCTGATTG GCTCGGGAAT CCGCGTGAAT
GTGGTCAGCC CAGGCCCGGT GACGACGCCG CTGTACGGCA AGCTCGGGCT GGATGCCGAC
ACGCTGGCCG CCACCGCCGC ACAGATCCAG GGCCAGGTGC CGCTGGGCCG CTTTGGTCAG
CCGGAAGAGA TTGCGTCGAC GGTGTTGCAT CTGTCGGCGC CCGAATCGGC CTTCATTGTC
GGCACGGAAA TCATTGCCGA TGGCGGCATG AGCCAGCTTT AA
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| Protein sequence | MNRFEGKTVL VTGGNSGIGL AAAQAFAREG ARVVITGRDA AALETARATL GTAGGNAALA
IRNETGTVAA ARELTRQLQE AGVRLDAVFI NAGMAKFAAV PDVEEALWDA TFNANVKGAF
FQMQALLPIL NKGTSIVLNG SINAHIGMPN SSVYAASKAA LISLAKTLSG ELIGSGIRVN
VVSPGPVTTP LYGKLGLDAD TLAATAAQIQ GQVPLGRFGQ PEEIASTVLH LSAPESAFIV
GTEIIADGGM SQL
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