Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3985 |
Symbol | |
ID | 6285250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | + |
Start bp | 251336 |
End bp | 252292 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642618476 |
Product | SMP-30/Gluconolaconase/LRE domain protein |
Protein accession | YP_001892517 |
Protein GI | 187926172 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3386] Gluconolactonase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCATGT TCCTGCTCTC GCCACCGGCG ATGCGTGAAG CCGAAGTCTT CACGCGCATG CCGGCCAAGT TTCGCAAGCC CGATGTCCAG ACGGAATGGG CACGCGCCAA TCGCGGCGGG CAAGCCACCG ACTCGTTTCT CGAAGGACCG GTGTGGTGTC CGGATGGCCG CGGCTACGGC CATCTGTACG TGACGGATAT CCCGCACGGC CGCGTCTTCC GCATCTCGCC GGCGGGCGAT TGGGAACTGG TGACCGAATA CGACGGCGAG CCCAACGGCA TGAAGTTCGT CGACGATGCA CACCTGCTCA TCACCGACTA CCGCAACGGG CTGATGCTGC TCGACATCAA GCGCGGCGAA GTCACGCCGT ATCTTGAGCG CCGCAACTCT GAGCGCTTCA AGGGCGTGAA CGACCTGACG TTCGATTCGC ACGGCAACCT GTACTTCACC GACCAGGGCC AGACCGGCCT GCAAGACCCG ACGGGGCGCG TCTATCGCCT CTCGCCGGAA GGCAGGCTCG ACATGCTGCT CGGCAATTGC CCCAGCCCCA ACGGGCTCGT GCTGTCGCCC GACGAGAAAG TGCTCTACGT CGCCATGACG CGCGGCAACT GCGTGTGGCG TGTGCCGTTG CAGGCCGATG GCTCTGTCAG CAAGGTCGGA CAGTTCTTCA CGTCGTACGG CCCGAGCGGC CCGGATGGTT TGACGATCGA CACCGCGGGG CGGCTGTTCG TGGCCAACCC CGGACTCGGC CGCGCATGGG TGCTGAACCA CCGTGCGGAG CCGGACATGA TCTTGACCAG CCCCGAAGGT GCATCGCTCA CGAACCTATG CTTCGGTGGC CCCGAAATGA AGACGCTCTT CATGACCGAA TCGGTGTCCG GCACGGTGCT CAAGTCCGAG ATGGACATCG CCGGCCCGCT GCCGCATCGA GCAAAGCAGA CAAAAGTCAC GCCCTAG
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Protein sequence | MSMFLLSPPA MREAEVFTRM PAKFRKPDVQ TEWARANRGG QATDSFLEGP VWCPDGRGYG HLYVTDIPHG RVFRISPAGD WELVTEYDGE PNGMKFVDDA HLLITDYRNG LMLLDIKRGE VTPYLERRNS ERFKGVNDLT FDSHGNLYFT DQGQTGLQDP TGRVYRLSPE GRLDMLLGNC PSPNGLVLSP DEKVLYVAMT RGNCVWRVPL QADGSVSKVG QFFTSYGPSG PDGLTIDTAG RLFVANPGLG RAWVLNHRAE PDMILTSPEG ASLTNLCFGG PEMKTLFMTE SVSGTVLKSE MDIAGPLPHR AKQTKVTP
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