Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3984 |
Symbol | |
ID | 6285249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | + |
Start bp | 250386 |
End bp | 251336 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642618475 |
Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
Protein accession | YP_001892516 |
Protein GI | 187926171 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACGA CTGCAACCAA GCCTGTCCTG CTCGTCACGG CGGCTGACCT GGCACCGCAA GCATTGGAGA TGCTGGGCGA TTTTGAAGTC GTGTTTGCCG GCAAGCAGCC CACCGAAGAC GACATCGTCG CGCTCTGCGC ACGGCACAAG CCGGTGGCGA TCATCGTGCG CTACGGCAAG ATCAACGCCC GCATCATGGA TGCAGCCGCC GGCAACCTGC AGGTGATCTC CAAGCACGGC AGCGGTATCG ACGTCATCGA TCAGGATGCT GCCGCGGCGC GTGGCATTGC GGTGCGTGCC GCGGTGGGGG CCAACGCGGC TGCTGTGGCC GAGCATGCGT GGGCGCTGAT CCTCGCATGC GCAAAGTCCG TCCCGCAGCT CGACGCGCGC ATGCGTGCTG GGCATTGGGA CAAGGCGACG CACAAGTCGG TCGAACTGGA TGGCCGCACG CTTGGCCTGG TCGGCCTGGG TGCGATCGGG CGCCGGACTG CTGCCATCGG CCTGGCGTTC GGGATGAAGG TTCTTGCATT CGACCCGTAC ACGAAAGAGG CGCCGGCAGG CGTCCAGCTG GTGGCGCTCG GTGAGTTGTA CGCGCAGTCT GACGTGGTCT CGCTGCACTG CCCGTTGACC GCCGAGAACC GCAAGATGCT GAACCGCGAC GCGTTCAGCT GCTTCAAGCC CGGCGCGATT CTGGTCAACA CGGCGCGCGG CGGCCTCATT GACGAAGCCG CGCTGGTGGA AGCGCTGGCC AACGGCCGAC TCCGTGCAGC GGGGCTCGAC AGCTTCGACG TGGAGCCGAT GACGGTGCCG CATCCGTTCC AGGGCGTTGC CAACATCATT CTGTCGCCGC ACATCGGCGG CGTGAGCGAC GCGGCCTACG TGAACATGGG TAAGGGCGCC GCGGCCAATG TGCTCGCAGT GATCGAGGAA CGTGCCAGCA CGGCGGCGTG A
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Protein sequence | MSTTATKPVL LVTAADLAPQ ALEMLGDFEV VFAGKQPTED DIVALCARHK PVAIIVRYGK INARIMDAAA GNLQVISKHG SGIDVIDQDA AAARGIAVRA AVGANAAAVA EHAWALILAC AKSVPQLDAR MRAGHWDKAT HKSVELDGRT LGLVGLGAIG RRTAAIGLAF GMKVLAFDPY TKEAPAGVQL VALGELYAQS DVVSLHCPLT AENRKMLNRD AFSCFKPGAI LVNTARGGLI DEAALVEALA NGRLRAAGLD SFDVEPMTVP HPFQGVANII LSPHIGGVSD AAYVNMGKGA AANVLAVIEE RASTAA
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