Gene Rpic_3978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3978 
Symbol 
ID6285238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp242213 
End bp243364 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content67% 
IMG OID642618469 
ProductEnoyl-CoA hydratase/isomerase 
Protein accessionYP_001892510 
Protein GI187926165 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCG TCCAATTGGA GACGGTGCCG CCCCAGGCCG CCGCTGCCGA GCCCGAGGTG 
TTGATGCGTG TGGTGAACCG CCTGGCCATC ATCACCCTGA ACCGGCCGTC TGCGCTGAAC
GCGCTGTCGC ACGGCATGGT GCGCCAGTTG GCCACGCTGC TGGAGCAATG CCGCCATGAC
GACGGCATTG CCGCGCTGGT GCTGCGCGGC GCGGGCCAGA AAGGCTTCTG CGCCGGCGGC
GATGTGCGCG CGCTCTATCA GCTTGCGCAA CAGGGCCGCA TGGACGGCGA CGACGGCTGG
CTGCAATTCT TCGTCGACGA ATACCGGCTC GACTACGCGC TGCACCAGTT TCCGAAGCCC
ATCGTTGCGC TGATGGACGG CGTCACCATG GGCGGCGGCA TGGGCCTTGG GCAGGCCGCA
AGGCTGCGCG TCGTGACCGA GCGCACGAAG ATGGCGATGC CGGAAACGCG CATCGGCTTT
CTGCCCGACG TGGGTGCTAC GCGCTTTTTG AGCGTGATGT CGCCGGAGCT TGAGTTGTAT
GTCGGCCTCA CGGGCGTAAC GCTGACCGGC GCCGACGCGC TGCATTGCCA CCTGGCCGAT
GTGTGCGTGC CTGCCGAATG GCTTGCCTCA TTCGAAGACC GCCTGCAGCG CATGCCGCAC
GATGGCGATC TCATGCAGGC CTTGCGCCGC GTGTTCGAGC CGCCGTGCAA CATTGTTCCG
CACGCGCCGC TGGCACAGGC GACGCCGTGG GTGCAGCGCT ATTTCGACCG CCGTTCGTCG
GTCGATCGCA TTGTCGCCAC GCTGCGCGAG AGCCTGGAGC GCGAACAGGC ACGGGAGCCG
CGCCAATGGC TTCAGGCGAC GCTTGAAGCC ATGACCACAC ATTCGCCGAC GATGCTGCAT
GTCACGCGCG AAGCGTTGCT GCGTGGTCGG CAGTTGTCGC TGGCGGAGTG CTTTCAGATG
GAGCTGGGCA TCGTTGCGCG CGGAATCCAG GAAGGCGATT TCTGCGAAGG CGTGCGCGCG
CATCTGGTGG ACAAGGATCA CCGCCCTGGC TGGGCGCCCG CCACGCTCCC GCAGGTGCGG
CCTGAGCGGG TGCGGCATTT TCTGACGTCG CCCTGGCGGG CGGAGCGGCA TCCGTTGGCG
GGGCTTTGCT GA
 
Protein sequence
MSAVQLETVP PQAAAAEPEV LMRVVNRLAI ITLNRPSALN ALSHGMVRQL ATLLEQCRHD 
DGIAALVLRG AGQKGFCAGG DVRALYQLAQ QGRMDGDDGW LQFFVDEYRL DYALHQFPKP
IVALMDGVTM GGGMGLGQAA RLRVVTERTK MAMPETRIGF LPDVGATRFL SVMSPELELY
VGLTGVTLTG ADALHCHLAD VCVPAEWLAS FEDRLQRMPH DGDLMQALRR VFEPPCNIVP
HAPLAQATPW VQRYFDRRSS VDRIVATLRE SLEREQAREP RQWLQATLEA MTTHSPTMLH
VTREALLRGR QLSLAECFQM ELGIVARGIQ EGDFCEGVRA HLVDKDHRPG WAPATLPQVR
PERVRHFLTS PWRAERHPLA GLC