| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3974 |
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| Symbol | |
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| ID | 6285230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | + |
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| Start bp | 237192 |
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| End bp | 238886 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642618465 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001892506 |
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| Protein GI | 187926161 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.136654 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAAG CGGTATCTGC AGCACAGGGT TTTGTGGAAG CGCGCGATTT TCTGCTGCGC
CATCGCACCG ACTACGACCG CGCGTATCGC GAGTTCGCGT GGCCGAAGCT GGACACGTTC
AACTGGGCGC TCGACTACTT CGATGTGATG GCGCGCGGCA ACGATAACCC GGCGCTGTGG
ATCGTCGATG ACGCGCAGGG CGAAGGGTTG AAGCTGTCGT TTGCGCAGAT GTCGGAGCGC
TCGTCGTGCA TGGCGAACTT CCTGCGCGGG CTTGGCATGG TGCGTGGTGA CCGTCTGCTG
CTGATGCTGC CGAACCGCGT CGAACTGTGG GACGTGATGC TCGCGGCGAT GAAGCTCGGT
GCGGTGGTGC TGCCGGCTAC GACGCAGCTT TCGCCGGATG ACGTGCGCGA CCGCGTTGAA
CTGGGCGGCG CGACATGCGT GGTTGTTGAT GCGGCAGAGT TGCACAAATT CGAGAGTGTT
GATGCGAGTG TCAAGCGCAT CGCCGTGGGC GCGCAGCGCG ATGGCTGGAT CGACCTGGCA
GCGGCTTACG ACGCGCCCGC GGAGTTCGTG CCCGACGGCC CGACCAAGGC GACCGACCCG
CTGCTGCTGT ACTTCACCTC GGGCACCACG TCCAAGCCGA AGCTCGTCGA ACACACGCAC
CAGAGCTATC CGGTCGGACA CCTGTCGACC ATGTACTGGA TCGGCCTGCA ACCCGGCGAC
ATCCACTGGA ACATCAGCTC ACCCGGCTGG GCGAAACACG CGTGGAGTTG CTTCTTTGCC
CCGTGGAACG CGCAGGCCTG CGTCTTCGTT TACAACTACG CGCGCTTCGT GCCGAAGGAC
ACGCTGGACG TGCTGGTGCG CTTTAACGTG ACCACGCTGT GCGCGCCGCC CACCGTGTGG
CGCATGCTGG TGCAGGAGCC GCTGGCCACC TACGCCGTCA AGCTGCGCGA GATCGTCGGT
GCGGGCGAGC CGCTGAACCC CGAGATCATC GAGCGCGTGC GCAGCGCCTG GGGCGTGACC
ATTCGCGACG GCTTTGGCCA GACCGAGACC ACCTGCCAGA TCGGCAACAC GCCGGGCCAG
CCGGTCGTGC CGGGCTCGGT CGGGCGCCCG CTGCCCGGCT ACCGCGTGGA GCTGGTCGAC
CACGACGATC AGCCCGCCAG CGAAGGCGAG ATCGTGCTGC CGCTCTCGCA CCGCCCGCTC
GGGTTGATGC AGGGCTATGC CAACAACGCC AAAGCCACGG CCGAGGCGAT GCGCAACGGC
TATTACCACA CCTCCGACGT CGCGATGCGG CGCGACGACG GCTACTTCGT CTATGTGGGC
CGCACCGACG ACGTGTTTAA GTCGTCCGAC TACCGCCTGA GCCCCTTCGA GCTGGAAAGC
GTGCTGATCG AGCACGAAGC CATTGCCGAG GCCGCCGTGG TGCCGAGTTC CGATCCGCTG
CGCCTGTCGG TGCCCAAGGC ATTCGTGACG GTGCGCCAGG GCTATGAGGC TGGCCCTGAA
CTGGCCCGGG CCGTGTTCCT GTTCTCGCGC GAAAAGCTGG CGCCCTACAA ACGCATCCGC
CGGCTGCAGT TCAGCGAGCT GCCCAAGACC ATCTCCGGAA AGATCCGGCG CGTGGAACTG
CGTCGGCTGG AGCTTGAACG CACGCCGCAA CCGGCTCGCC TGCCTGGCGA GTACTGGGAA
GAAGACTTTG CCTGA
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| Protein sequence | MNEAVSAAQG FVEARDFLLR HRTDYDRAYR EFAWPKLDTF NWALDYFDVM ARGNDNPALW
IVDDAQGEGL KLSFAQMSER SSCMANFLRG LGMVRGDRLL LMLPNRVELW DVMLAAMKLG
AVVLPATTQL SPDDVRDRVE LGGATCVVVD AAELHKFESV DASVKRIAVG AQRDGWIDLA
AAYDAPAEFV PDGPTKATDP LLLYFTSGTT SKPKLVEHTH QSYPVGHLST MYWIGLQPGD
IHWNISSPGW AKHAWSCFFA PWNAQACVFV YNYARFVPKD TLDVLVRFNV TTLCAPPTVW
RMLVQEPLAT YAVKLREIVG AGEPLNPEII ERVRSAWGVT IRDGFGQTET TCQIGNTPGQ
PVVPGSVGRP LPGYRVELVD HDDQPASEGE IVLPLSHRPL GLMQGYANNA KATAEAMRNG
YYHTSDVAMR RDDGYFVYVG RTDDVFKSSD YRLSPFELES VLIEHEAIAE AAVVPSSDPL
RLSVPKAFVT VRQGYEAGPE LARAVFLFSR EKLAPYKRIR RLQFSELPKT ISGKIRRVEL
RRLELERTPQ PARLPGEYWE EDFA
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