| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3971 |
|---|
| Symbol | |
|---|
| ID | 6285225 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010678 |
|---|
| Strand | + |
|---|
| Start bp | 234306 |
|---|
| End bp | 234818 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642618462 |
|---|
| Product | GCN5-related N-acetyltransferase |
|---|
| Protein accession | YP_001892503 |
|---|
| Protein GI | 187926158 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.15635 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTTA TCGCCATCCG CCCGTTGATC GATGAGGATG TTGCAGCGTT CAAGGCGCTG
CGCCTGAGGG CCATTCAAGA CGCGCCCACC GCCATCTGGC CGACGCACGA TGAAGAGGCT
GCGCGCACGC TTGATGAAAC GCGTAACCGC ATCCGCACAA CCGATCATCA GATCGTGTTG
GGTGCTTTTG CCGGGCCTGA GCTGGTCGGT ATTGCCGGCT TGCGGCGTGA AGCGCTTGCG
CAAGTCGCGC ACAAGGCCGT GCTGTGGGGC GTGTTTGTTG ACCCTGCACA TCGGCGCGGC
GGCATTGCCG GCCGCCTGCT GCACGCCGCC ATTACGCACG CGCGTGCTGC ACGCGTATTG
CAGATTCATC TTTGCGTGAA CGCCGAAAAC CCGCGTGCGC AAGCGCTGTA TCGCAACGCG
GGTTTCGAAA CCTTCGGCAT TGAGCGCCGC GCCATGCGTG TCGGTGATCG CTTCTACGAC
GAAGAACACA TGGCGCTGCG GCTGGACGCC TAG
|
|---|
| Protein sequence | MSVIAIRPLI DEDVAAFKAL RLRAIQDAPT AIWPTHDEEA ARTLDETRNR IRTTDHQIVL
GAFAGPELVG IAGLRREALA QVAHKAVLWG VFVDPAHRRG GIAGRLLHAA ITHARAARVL
QIHLCVNAEN PRAQALYRNA GFETFGIERR AMRVGDRFYD EEHMALRLDA
|
|---|
| |