Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3968 |
Symbol | |
ID | 6285217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | + |
Start bp | 227801 |
End bp | 230461 |
Gene Length | 2661 bp |
Protein Length | 886 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642618459 |
Product | cyanophycin synthetase |
Protein accession | YP_001892500 |
Protein GI | 187926155 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type [TIGR02068] cyanophycin synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAGA AGGACATTGA GATTCTCGAT GTCATGTCGC TGCGCGGCCC GAATATGTGG ACATATCGGC CAGTGCTGGA GGCATGGGTC GATATTGGTG AACTGGAGGA CTCTCCCTCC AACACGATTC CGGGGTTCTA CGAGCGTCTG TCGACATGGC TGCCCACGCT GATCGAGCAC CGCTGCAGCC CCGGCGTGCG CGGCGGTTTC CTGATGCGCT TGAAGGAAGG CACCTGGCCG GGGCACATCC TGGAACACGT CACCCTCGAG TTGCAGAACC TGGCCGGCAT GCCCGGCGGT TTCGGCAAGG CGCGCGAGAC ACCCGTGCGC GGCGTCTATA AGGTGATCGT CCGCGCCTGG CACGAAGACG TGACCCGTGC TGCCCTGTTC GCCGCCCGTG ATCTGGTCAT GGCGGCCATC GAAGACCGCC CGTACGACGT GGACGCCGCC GTCGAAACGC TGCGCGACAT GGTGGACGAA CAGTGCCTGG GCCCCAGCAC CGCCTGCATC GTCGAAGCCG CCGATGACCG CAATATCCCG TCCATCCGCC TGTCGGACGG CAATCTCGTG CAACTCGGCT ACGGCGCTCG CCAGCGCCGC ATCTGGACGG CCGAAACCGA CCGCACCAGC GCTATCGCCG AATCCATCTC GCGCGACAAG GACCTGACCA AGAGCCTGCT GCAGTCGTGC GGCGTGCCGG TGCCGGAAGG GCGCATGGTC GACAGCGCCG AAGACGCCTG GGATGCGGCC GAAGACATCG GCGTGCCGGT GGTGGTCAAG CCTTACGACG GCAATCACGG CCGCGGCGTA TTCACGAACC TGATGACGCG CGAAGAGGTG GAAACCGCTT ACGCCGTGGC CATCGAGGAA GGCAACGGCG TGATCGTCGA GCGCTTCGTC TCCGGTAACG AACACCGCCT GCTGGTGGTG GGCGGCCGCT TGGCGGCGGC GGCGATGGGC GAAACCGCGT CGGTGGTCGG CGATGGCAAC TCGACCATCG AAGAACTGAT CGAATCGCAG ATCAACTCCG ACCCGCGCCG CGGCAACACC GAAGAACACC CGCTGAACTG CGTGCGCCTG GATTCCGCCG CGCGCCTCGA ACTCAAGCGC CAGGGCTATG CCGACGGCAG CGCCGTGCCG CCCGCGGGCC GCAGCGTGCT GATACAGCGC AACGGCAACG TCGCCTTTGA CGTGACCGAC CGCGTGCACC CGAGCGTGGC CGCGCACGCA TCGCTGGCCG CGCGGGTTGT CGGACTCGAC ATTGCCGGTG TAGACTTGGT GGCCGAAGAC ATCTCGCGCC CGCTGGACGA GCAGCGCGGC GCCATTGTCG AAGTCAACGC CGGGCCCGGT CTGCTGATGC ATATTCGGCC GGCCCAGGGC GAACCACGCC CCGTGGGCCG CGCGATTGTC GACCACCTGT TTTCCGACAA GGATGGCACG CAGGACGATG GCCGCATTCC TATCGTCGGC ATCACGGGCA CCAACGGCAA GACCGTCGTG GCCAAGTTGG TGGCGCAGAT GCTGCAACTG TCGGGCAAGC ACACGGGGTT GGGCTGCAGC GATGGCCTGT ACCTCGATCG CCGTCAAGTG GAATCCGGCG CGCGTACCGA CCGCGCCGCG TGGGACGCCT GCCATCGCAT CCTGATGAAC CGCGCGGTGG AAGCCGCCGT GTTCGAGAGC GACAGCGGCA TGATCCTCTC GCAGGGGCTG CCGTATGACC GTTGCCAGGT GGGCGTCGTC ACCAACTTCG GCAAGCCCGA TCACCTGGGC GATTTCTACG TCGAAGACGA AGACCGCATG GTCAGCGTCC TGCGCACGCA GATCGACGTG GTGCTGAAGA CCGGCGTCGG CGTGCTCAAT GCCGCCGATG CGCGCCTCGT TGAAATGGCA GAGCTGTGCG ATGGCGAAGT GATCTTCTTC GCCTTGTCGG GCGATCTGGA GGCCATCGCC GCGCATCGCG CTGCTGGCAA ACGGGCCGTG TTCGTGCGCG ACGGCAAGGT GGTGCTCGCT ACTGGCCCGA CCGAACTGGC GCTGGCCGAC GTGTCGGCCA TTCCCCTGAC CTACGACGGC CGCGTGCCGT TCCAGCTTGA AAACGTGCTG GCGGCTGTGG CCACCGGCTG GGCTCTGGGC ATTTCGAACG ATCTGATGCG CGCCGGCATC ATGACCTTCG ATGTGGGGCA GGTGGATGTG CCGGGCCGCT TCACGCTGTT CCAGCACCAT GGCGCCACGA TCGTGGTGGA TGACGCGCAC AACGCGTCGG CACTGGAAGC CCTGGCCGCT GCGCTGGACA ACTTCCCGGC GCAACGCCGC ACGCTTGTGT TCGGCGCCGG CCTGCAACGC CGCGATGAAG ACCTGGTGGC GCAAGGCACG GTTATCGGAC AGACATTCGA CCGCGTGCTG CTGTGCGAAG ACGCCAGCGT CAAGCGCACC GATGCCGAGT TCGATCGCCA AGCACGCGCG CTGCTCAAGC AAGGGTTGCA GGCAGGCGGT CGCGTGGCTG AAGTCGTCGT CGAAGGGGCC AAGCGCCGGG ATGTCGTGGA CGCGGCGCTC TCGCAGGTCA CAGCAGGCGA CCTGCTGGTT TTGCAATGCG ATGAGTGTGC CATCGAGGGC ACCGTCCAGC AGGTACACCA GTGGATGGGC CGTGCCGAAT CCCAGAACTG A
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Protein sequence | MKKKDIEILD VMSLRGPNMW TYRPVLEAWV DIGELEDSPS NTIPGFYERL STWLPTLIEH RCSPGVRGGF LMRLKEGTWP GHILEHVTLE LQNLAGMPGG FGKARETPVR GVYKVIVRAW HEDVTRAALF AARDLVMAAI EDRPYDVDAA VETLRDMVDE QCLGPSTACI VEAADDRNIP SIRLSDGNLV QLGYGARQRR IWTAETDRTS AIAESISRDK DLTKSLLQSC GVPVPEGRMV DSAEDAWDAA EDIGVPVVVK PYDGNHGRGV FTNLMTREEV ETAYAVAIEE GNGVIVERFV SGNEHRLLVV GGRLAAAAMG ETASVVGDGN STIEELIESQ INSDPRRGNT EEHPLNCVRL DSAARLELKR QGYADGSAVP PAGRSVLIQR NGNVAFDVTD RVHPSVAAHA SLAARVVGLD IAGVDLVAED ISRPLDEQRG AIVEVNAGPG LLMHIRPAQG EPRPVGRAIV DHLFSDKDGT QDDGRIPIVG ITGTNGKTVV AKLVAQMLQL SGKHTGLGCS DGLYLDRRQV ESGARTDRAA WDACHRILMN RAVEAAVFES DSGMILSQGL PYDRCQVGVV TNFGKPDHLG DFYVEDEDRM VSVLRTQIDV VLKTGVGVLN AADARLVEMA ELCDGEVIFF ALSGDLEAIA AHRAAGKRAV FVRDGKVVLA TGPTELALAD VSAIPLTYDG RVPFQLENVL AAVATGWALG ISNDLMRAGI MTFDVGQVDV PGRFTLFQHH GATIVVDDAH NASALEALAA ALDNFPAQRR TLVFGAGLQR RDEDLVAQGT VIGQTFDRVL LCEDASVKRT DAEFDRQARA LLKQGLQAGG RVAEVVVEGA KRRDVVDAAL SQVTAGDLLV LQCDECAIEG TVQQVHQWMG RAESQN
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