Gene Rpic_3953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3953 
Symbol 
ID6285183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp213304 
End bp214131 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content68% 
IMG OID642618444 
ProductFAD-binding 9 siderophore-interacting domain protein 
Protein accessionYP_001892485 
Protein GI187926140 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2375] Siderophore-interacting protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.568339 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGCCT TCAATCGCAC ACAAGGTCTC ATGTCGCAGC TGCTCAGTTC TGTCAAACCC 
GCCACACGCC GCATGCGCGT GCGCGTGCGC GCAATCCATA CACTGTCGCC GCGCATGCGC
CGCGTAGTCT TTACCGGCGT GGCGGCTATG GATCTCGCTG ATCTGGCTGG CGCGGCGCCC
GGCGCGGCCA TCAAGCTGAT GTTTCCGCAC GATGCCGCGG GCCCCGGCCG CACGCTGGGG
CGTGCTTACA CCATCCGTCG CTATCACGCA GCGCGCGATG AACTGGAAAT CGATTTTGTG
GTGCACGACG AAACACCGGC CGCGCAGCAT GGCCCCGCTG CACGCTGGCT CGAACACGCC
GCCCCTGGCG ATGAAGTGGA ATTCGCCGGC CCCAAGCGCG GATTCCGTGC CGACCCAGCG
GCGCCGTGGA CGCTGCTGAT CGGCGATGAA ACCGCGTTGC CCGCCATCTT CGCGATTTTG
GAGGCGTTGC CCGAGCACGC GCAGGTGCTG ACCTATATCG CCATTGGCGA CGCCCGCGCC
CGACTCCCGC TGGAGGGCGC CCTGGCCGAG CACCCGCGCA GTCGCGGCAT CCACTGGGTG
GAGAGCGACA CGGCGCACGC CGGCGCCATG ATGGTCGGTG CGCTCAGCGC TCAAGCCATG
CCGGCCGGCA CGCCGCAGGT GTTCCTGGCC GGCGAGGCGT CCTTGCTCAA GCAGGTCCGC
ACGCTGCTCG AAGGCGCCTG GGCCGTGCCG CACGATGCCA TCGACGCCAA GGGCTATTGG
ACGGCCGGCC TCTCGCGTGA AGAACGCAAG GCGAGCGAGG CGCGCTGA
 
Protein sequence
MFAFNRTQGL MSQLLSSVKP ATRRMRVRVR AIHTLSPRMR RVVFTGVAAM DLADLAGAAP 
GAAIKLMFPH DAAGPGRTLG RAYTIRRYHA ARDELEIDFV VHDETPAAQH GPAARWLEHA
APGDEVEFAG PKRGFRADPA APWTLLIGDE TALPAIFAIL EALPEHAQVL TYIAIGDARA
RLPLEGALAE HPRSRGIHWV ESDTAHAGAM MVGALSAQAM PAGTPQVFLA GEASLLKQVR
TLLEGAWAVP HDAIDAKGYW TAGLSREERK ASEAR