Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3940 |
Symbol | glgA |
ID | 6285140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 197313 |
End bp | 198944 |
Gene Length | 1632 bp |
Protein Length | 543 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642618431 |
Product | glycogen synthase |
Protein accession | YP_001892472 |
Protein GI | 187926127 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0297] Glycogen synthase |
TIGRFAM ID | [TIGR02095] glycogen/starch synthases, ADP-glucose type |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.844931 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTTGT CGCTGAACGT TCTCTTCGTC GCTTCTGAAG CTGTGCCGCT GGCCAAGACC GGCGGGCTTG GAGATATGGT CGGGGCCTGC GCGAACGCAC TGCGCCGCGC CGGCATGAAA GTGACGGTGA TGCTGCCGGG CTATCCCGAC GCCATCACGC AGTTGCAGCA CACCCGCACG GTGTGCGAGT GGACCGACCT GCCCGGTGGC CCCGCACGCC TGTTGAGCGG GCACATGGGC GCGCAAGGCA TCCCGGTACT GCTGTTCGAC GCGCCGGCAC TGTTCGCGCG GCCGGGCAAC CCATATCTGG ATGCACATGG CGAGCCCTAT GAAGACAATG CGCTGCGCTT TGCGTCGTTC AGCCAGGCCG CTGCGCGCGT TGCCGGCGGC GTACCCGGGG TGCATCGCTC TGACACCGTG CAGGCGCATG ACTGGCACGC GGGGCTGGTG CCGCTGTTCG TCAAGCGCGC GCAGGCGCCG GTGAAGACCG TCTTCACGAT CCATAACCTC GCGTTCCAGG GCAATTTCCC GATGCACGTG GTGCCGGACA TTGGCGTGCC GCCCGATGCC GCGCATGAAG CCGAGTTCTG GGGCCAGTTC AGCTTCCTGA AGGCCGGCCT GCTTTGGGCC GATCGCATCA CCACCGTGAG CCACGCGTAT GCGCGCGAAA TCCTGACCGA CACGGCGGGT TGCGGCATGC AGGACCTCCT GCGCGCGCGC CAGCGAGACC TCATCGCCAT CCTCAACGGC ATCGACAACG ATGTGTGGAA CCCGTCGAAA GACCCGCTGC TGCCGCAGCC GTTTGTTGCT TCCAACCTGA GCGGCAAGCA CACCGCCAAG CGCGTGCTGC AGCAGCGCTT TGGCCTGCCG GAAGACGCCA AAGCGCCGCT GCTGGCCGTC GGCAGCCGCC TGACGCATCA GAAGATGGCC GACGTGACGT TGCAGGCGCT GCCGCAATTG CTGGAATCCA ACCCGCAATT GCAGGTGGCG GTGCTCGGCT GCGGAGAGCA CGCCTACGAG ACCGGCATGG CGGACCTGGC GGCGCGCTAT CCGCGCCAGG TGGCCGCAAA AATCGGCTAC ACCGAGGCTT TTGCCCACCT GCTGCACGCC GGCGCCGATA TCCTGCTGCA TGGCAGCCGC TTCGAGCCGT GCGGCCTGAC GCCGCTCTAT TCGATGCGCT ATGGCACGGT GCCCGTCGCG TCACGCGTGG GCGGGCTGAT GGACACCATC ACCGATCGTG GCTCGCCCGA AGCGGCGCTG CACGGCGCCA CGGGTTTCCT GTTTGACGGC GACACCGCCG ACGCCATGGT CGCCGCAGTG GAGCGTGCGT TGCACGTCTT TGCCCAGCCG CAGGCGTGGC GCATCCTGCA ATACAACGGC ATGACGACCG ACTTCGGCTG GTCGCAGCCT GCCCGCGAAT ACATCGCGCT GTATCGCACC CTGGTGCCGG CCGCTACGCC CATGCCCGCT GTGGCGCTGG TGCAAGCGCC CGTCGCACCG GACGCTGTGC ACACGCCCCG CCCCGAACAA CCTGTGCGTA CGCCGGCGCG GCGACGCTCG ACGGCGCTGT CCGACGAGAT CCGAGCGCAC GCGGTGGCGC GCGCCGCCAG TGCCGAAAAG ATCCGTGCCT GA
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Protein sequence | MTLSLNVLFV ASEAVPLAKT GGLGDMVGAC ANALRRAGMK VTVMLPGYPD AITQLQHTRT VCEWTDLPGG PARLLSGHMG AQGIPVLLFD APALFARPGN PYLDAHGEPY EDNALRFASF SQAAARVAGG VPGVHRSDTV QAHDWHAGLV PLFVKRAQAP VKTVFTIHNL AFQGNFPMHV VPDIGVPPDA AHEAEFWGQF SFLKAGLLWA DRITTVSHAY AREILTDTAG CGMQDLLRAR QRDLIAILNG IDNDVWNPSK DPLLPQPFVA SNLSGKHTAK RVLQQRFGLP EDAKAPLLAV GSRLTHQKMA DVTLQALPQL LESNPQLQVA VLGCGEHAYE TGMADLAARY PRQVAAKIGY TEAFAHLLHA GADILLHGSR FEPCGLTPLY SMRYGTVPVA SRVGGLMDTI TDRGSPEAAL HGATGFLFDG DTADAMVAAV ERALHVFAQP QAWRILQYNG MTTDFGWSQP AREYIALYRT LVPAATPMPA VALVQAPVAP DAVHTPRPEQ PVRTPARRRS TALSDEIRAH AVARAASAEK IRA
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