| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3936 |
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| Symbol | |
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| ID | 6285129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | - |
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| Start bp | 185005 |
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| End bp | 187305 |
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| Gene Length | 2301 bp |
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| Protein Length | 766 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642618427 |
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| Product | glycogen debranching enzyme GlgX |
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| Protein accession | YP_001892468 |
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| Protein GI | 187926123 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0659462 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.365741 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCCGCT TCCCCAAAAC CCTCTCCCCC GGCAAACCCT TCCCCCTAGG CGCTCAATGG
GACGGCCTGG GCATCAACTT CGCCGTCTTC TCCGCCAACG CCAGCAAGAT CGAGCTCTGC
ATCTTCGACC CCGCTGGCCG CAAGGAACTG ACCCGCTTCG CCCTGCCTGA ATGCACCGAT
GAGGTCTGGC ACGGCTACCT GCCCGGGGTG GAAGCCGGCC TCGTCTACGG TTACCGCGCC
TACGGCCCGT GGGAGCCGCA GCACGGCCAT CGCTTCAACC CCCACAAGCT GCTGCTCGAC
CCCTACGCCC GCCGGCTGGT AGGCGCGCTG CGCTGGTCCG ATGCGCTGTT CGGCTATCGG
CTGAACTCCA ACCGTGGTGA CCTTTCATTC GACCGGCGCG ACAGTGCACC GGCCATGCCC
AAGGCCGTGG TCACCGATGA GTCGTTCAAC TGGGGCAACG ATATCCGCCC GAACACACCA
TGGTCGCGCA CGGTCATCTA TGAAGGACAT GTGCGCGGGA TGTCGATGCT GCGCGAAGAC
CTGCTGCCGC CCGAGCGCGG CACCTTCAGC GCGCTGGGCG ACAGCGTCTT TATCGAGCGC
CTGCAGCGGC TGGGCATCAC CGCCATCGAA CTGTTGCCCA TTCACGCCTT CCTGCAGGAC
CAGTTTCTGG TGGAGCGCGG CCTGCGCAAC TACTGGGGCT ACAACACGCT GTGCTTCTTT
GCGCCAGAGC CGTCGTACCT GTCGGCGCCT TCGCTGCATG AGCTGAAGGT GGCGATCCGG
CGGCTGCATG CAGCCGGCAT CGAGGTGTTG CTCGACGTCG TCTACAACCA CACGTGCGAG
GGCAGCGAGT TGGGGCCGAC GCTTTCGTTC CGGGGGCTGG ACAACGCGAG CTACTACCGC
CTCGTGCCGG GCCAGGAACG CTACTACATC AACGACACGG GCTGCGGTAA CACGCTGAAC
CTGTCGCATC CGCGCGTGCT GCAGATGGTG ATGGATTCGC TGCGCTACTG GGTCAACGCA
TTCCATGTGG ATGGCTTCCG CTTTGACCTG GGCGTCACGC TCGGGCGCGA GGGCAACGGC
TTCGATCCGG GCTCGGGCTT CTTCGATGCC ATACGCCAGG ACCCGGTGCT CTCCACCGTC
AAGCTGATCT CCGAACCTTG GGACGTCGGC CCTGACGGCT ACCAGGTCGG CAACCACCCG
CCTGGCTTTG CCGAGTGGAA CGACCGCTTT CGCGATGGCA TCCGCCGCTT CTGGCGTGGC
GATTCGGGCC AGCGCCCGGA CCTCGCCGCG CGCCTGACCG GCAGTGGCGA CATGTTCGAC
CGCCGCCATC GCCGGCCGTG GGCGTCGATC AATTACGTGG CCTCGCACGA CGGCTTCACG
TTGCACGACC TCGTGAGCTA CGCCGACAAG CACAACGATG CCAATGGCGA AGACAACCGC
GACGGCCACA ATGACAACTG CAGCGCCAAC TGGGGCACCG AAGGCCCCAC CCAGGACCCT
GCCATCCAAG CCCTGCGAGA ACGCGTGACG CGCGCACTGC TGGCCACGGT GTTCTTCTCC
AACGGCACGC CGATGCTGTT GGCAGGCGAT GAATTCGGCC GCACGCAAGA CGGCAACAAC
AACGCCTATT GCCAGGACAA CGCCCTTTCA TGGCTCGATT GGTCGCTGCT GCAGAAAGAC
CCCGGGCAGG CGCTCGCCCG CTATACGGCG CGGCTGATCG CGCTGCGCAA GGCAAGCCCG
GCGCTGCGCT GGCCGCATTA CGTGCACGGC AACACCGAGA TCCTGCCGGG CGTGCCGGAC
ATCGCCTGGT TTGACGAGCG CGGCCAGACG CTCTCACCCG ACGCGTGGAA CGACAGCGAG
GCGCGGGCGT TGGCGCTGCG CCGCGCCTGC GTCGAGACCA TCGACGCAGA GGCGCGCCCG
CACGTGGCGT TGTTGCTCAT CAACGGTGCG GCGACAGACC TGACGTTCAC GCTGCCCGAG
CCGGCCATGG ACTGGCTACT CGCCATCGAC AGCGCAGCGC CCGAGCAAGA CGCTCGACCA
CACAGCGGCG GTACCCTCAA CGTGGCAGGG CGCAGCGTTG TGCTGCTGCT CGCCACGCAG
CTCGCCACGA TCGCCCAGAT TGCCGGGCAG CCCGATGCAG ACGCCAGCGG CGAAACCCTC
GGGCACGTTC CCGACGCGCA CAACGCAGCG CAGAACGCAC TGCAGAACGC CACCCCAGAA
CAACCGGCGT CTGACGACGA GCGCACCGCC CCAACCGCCG GCCAAGCAGC CAGCGATGCC
AATGGAGACG CCACGCGATG A
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| Protein sequence | MLRFPKTLSP GKPFPLGAQW DGLGINFAVF SANASKIELC IFDPAGRKEL TRFALPECTD
EVWHGYLPGV EAGLVYGYRA YGPWEPQHGH RFNPHKLLLD PYARRLVGAL RWSDALFGYR
LNSNRGDLSF DRRDSAPAMP KAVVTDESFN WGNDIRPNTP WSRTVIYEGH VRGMSMLRED
LLPPERGTFS ALGDSVFIER LQRLGITAIE LLPIHAFLQD QFLVERGLRN YWGYNTLCFF
APEPSYLSAP SLHELKVAIR RLHAAGIEVL LDVVYNHTCE GSELGPTLSF RGLDNASYYR
LVPGQERYYI NDTGCGNTLN LSHPRVLQMV MDSLRYWVNA FHVDGFRFDL GVTLGREGNG
FDPGSGFFDA IRQDPVLSTV KLISEPWDVG PDGYQVGNHP PGFAEWNDRF RDGIRRFWRG
DSGQRPDLAA RLTGSGDMFD RRHRRPWASI NYVASHDGFT LHDLVSYADK HNDANGEDNR
DGHNDNCSAN WGTEGPTQDP AIQALRERVT RALLATVFFS NGTPMLLAGD EFGRTQDGNN
NAYCQDNALS WLDWSLLQKD PGQALARYTA RLIALRKASP ALRWPHYVHG NTEILPGVPD
IAWFDERGQT LSPDAWNDSE ARALALRRAC VETIDAEARP HVALLLINGA ATDLTFTLPE
PAMDWLLAID SAAPEQDARP HSGGTLNVAG RSVVLLLATQ LATIAQIAGQ PDADASGETL
GHVPDAHNAA QNALQNATPE QPASDDERTA PTAGQAASDA NGDATR
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