Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3934 |
Symbol | |
ID | 6285116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 180846 |
End bp | 183128 |
Gene Length | 2283 bp |
Protein Length | 760 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642618425 |
Product | 4-alpha-glucanotransferase |
Protein accession | YP_001892466 |
Protein GI | 187926121 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1640] 4-alpha-glucanotransferase |
TIGRFAM ID | [TIGR00217] 4-alpha-glucanotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCGCA CGACCAACCT ATCCGGCACG CCGCGCACGC CGCTCCAGCA ACTGGCCACC GATGCCGGGC TGCTGGTCGA CTGGGAAGAT GCTGCCAGCC GGCCCATGCG CGTGGCCGAC GAGGTGCTGC GCGCCGTGCT CTTCACGCTC GGCCTGCCGG CCGGCACCCC GGCCCAGGTG TCGGAAAGCC AGGCGCGCCT GCGCGCGGAA GCCGAAGCGG TGGCCATACC GCCGCTCGTG ACCGGCGTGG TCGGGCAACC GATCGTGCTG CAGACGTCTG CGCCCCAAGC CGCGTTGCTG GACGGACAAC CCTATCGTGT TGATTTCGAG TCCGACGGCA GCACCGAGGG CAGGATCAGC GTCAGCGCAA GCGAGCACCA TGCAACGCTG CGCCTGGCAG CGGTACAGGC CGTTGGCTAC CACCGCCTGA CCATCGACGC CGGGCCGGGC ACCGTGATCG AAGCCACGCT CGCCATTGCT CCTGCGCGTT GCTATGGTGT GGCCGATGCG CTACGCCAGC ACGATCGCCC CACCGACTCA CGCCTGTGGG GCGCCTCCGC ACAGCTCTAT GGCTTGCGAT GCGATGCGGA ACGCGCGGCC AGCAGCGCAG GCCTGGGCGA CTACACCGCC GCGGGCACGC TGGCGCGGCA TCTCTCGCAG CGCGGCGCGG ATGCGTTGGC ACTGAGCCCT GTGCACGCCA TGTTCACGGC CGACCCGCGT CGGTATTCGC CGTACTCGCC ATCGAGCCGC CTGTTCCTGA ACGCGTGGAT GATCGACCCG GCCGCGCTCT TTGGGAACGA AACCGTACGG CAAGCCGTGG TCGACTGCAA CCTCGTCGCG GACTATGCCC GGCTGGAAGC CGCACCGCTC ATCGACTGGC CGGCCAGCGG CAACGCCCGC ATGACGGTGC TGCGCGCGCT GCATCGGCGC CTGCTGCAAG CACCGCTCGG AGACACCATC GGCCAGACGC TGCTGGACGA TTTTCGCGCG TACTGCATCA ATGGCGGCGC CAGCCTGCGC GACCATGCGC ACTTTGAAGC GCTGAATGCG CACCTTGGGC CCGCGCATTG GAAGCAGTGG CCCGCGCAGT ATCAAGATCC GAGCTACCTG GGCGTTCAGG CCTTCGCGCG TGAGCATGAA GATGCGGTGA ACTTCCACCT CTTCCTGCAA TGGGCGGCGG CACGCCAGTG GGCCATCGCG CAGCGCACCG CGGAGGGCGC CGGCATGGCC ATCGGCCTCG TCGCCGACCT GGCTGTTGGC ACCGACAGCG CAGGCAGCCA CGCGTGGGCC CGGCAACGCG ACTTGCTGAT CGGCGTGACG GTGGGTGCGC CGCCCGATGT GTTCAACGCA CAGGGCCAGG GCTGGGGCCT GACCACCTTC AGCCCGCGTG CCATGCGCAC GCAAGGCTTT TCGGCCTTTA TCGAGATGCT GCGCGCGGTG ATGGCCGTGC CCGGCGGTGT GCGCATCGAC CACGTGCTCG GGCTCATGCG GCTGTGGGTG ATTCCCGATG GCGCGCGGCC GCTCGACGGC GTGTACCTGC GCTACCCGAT GCAGGATCTG CTGCGGCTGG TGGCGCTGGA ATCGTGGCGC AACCGATGCA TCGTCATTGG CGAAGACCTG GGCACCGTGC CTGCTGGCCT GCGCGACAAG CTCGCCGACG ACGGCCTGCT CGGCATGCGC ATCCTCTGGT TCGAGCGCGA ATACACGCGC GACGATGCGC CCTTCAAGGC GCCGCGCACG TGGGCGCCAG CCTCCGTCGC GATGACCAGC ACGCACGACC TGCCCACGCT CGTCGGCTGG TGGATCGGCA ACGATCTGCG CTGGCAAGCC CAGCTCGGCC TGCTGCCGGC CGGCATGAGC GAGAGCGAGG CGCACGCGCG CCGCATGGAC GATCGCGCCG CACTGGTTGC CGCCTTTGCA GAGCACAACC GGCTGGTGCT GGCCGATGGC GGCGTGCCGA TGATCGGCGT GGCGTCGCTG CAGGCGGCGC TGGAACAGAC GCGCGTGGCC ACCGCGGCGC AAGCTGAAGT CATCTTGCAA GCCAGCGCGC AGGACTTTGC CACGGCAGCC ACCGTGTTTA CGGGCGCGGC CAATACGCCG CTTGCGCTGG TGCCGCTGGA GGACTTGCTC GGCCTTGTCG AGCAGCCCAA CCTGCCGAGC ACGATCGACA CACACCCGAA CTGGCGACGT CGTCTGCCAG GGCCGGCCGG CACGCTGATC GAGGCACCCA CGGTGCTGGC GCGCCTGTCA GCGCTGGCCA ACGCGCGCAA CAGCATGTCA TGA
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Protein sequence | MDRTTNLSGT PRTPLQQLAT DAGLLVDWED AASRPMRVAD EVLRAVLFTL GLPAGTPAQV SESQARLRAE AEAVAIPPLV TGVVGQPIVL QTSAPQAALL DGQPYRVDFE SDGSTEGRIS VSASEHHATL RLAAVQAVGY HRLTIDAGPG TVIEATLAIA PARCYGVADA LRQHDRPTDS RLWGASAQLY GLRCDAERAA SSAGLGDYTA AGTLARHLSQ RGADALALSP VHAMFTADPR RYSPYSPSSR LFLNAWMIDP AALFGNETVR QAVVDCNLVA DYARLEAAPL IDWPASGNAR MTVLRALHRR LLQAPLGDTI GQTLLDDFRA YCINGGASLR DHAHFEALNA HLGPAHWKQW PAQYQDPSYL GVQAFAREHE DAVNFHLFLQ WAAARQWAIA QRTAEGAGMA IGLVADLAVG TDSAGSHAWA RQRDLLIGVT VGAPPDVFNA QGQGWGLTTF SPRAMRTQGF SAFIEMLRAV MAVPGGVRID HVLGLMRLWV IPDGARPLDG VYLRYPMQDL LRLVALESWR NRCIVIGEDL GTVPAGLRDK LADDGLLGMR ILWFEREYTR DDAPFKAPRT WAPASVAMTS THDLPTLVGW WIGNDLRWQA QLGLLPAGMS ESEAHARRMD DRAALVAAFA EHNRLVLADG GVPMIGVASL QAALEQTRVA TAAQAEVILQ ASAQDFATAA TVFTGAANTP LALVPLEDLL GLVEQPNLPS TIDTHPNWRR RLPGPAGTLI EAPTVLARLS ALANARNSMS
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