Gene Rpic_3931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3931 
Symbol 
ID6285113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp175668 
End bp176588 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content69% 
IMG OID642618422 
Productamidohydrolase 2 
Protein accessionYP_001892463 
Protein GI187926118 
COG category[R] General function prediction only 
COG ID[COG3618] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.788161 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACCC GCCGCGCCTT CAACACCGGA TTGCTTGCCA TGCTAGGTTC CACCGCCCTT 
GCCGGCTGCG CCGCCACCGG CAACAGCGAC GCCACGCGCG GCACTTCCGC GGGCATCACT
GCCATCGATA CGCATGCGCA TGTATTCGAG CGCGGCTTGC CGCTGGCCGA TGCGCGCCGC
TATGCGCCCA CGTATGACGC GCCGCTGCCG GCCTACCTGG CGCAGCTCGA CGCGCATGGC
GTGTCGCACG GTGTGCTGGT CCAGCCGAGC TTCCTGGGCG TCGACAACAG CTACCTGCTG
GCCGCGCTCA AACAGGCGCC GCAGCGCTTG CGCGGCGTGG CCGTCATCGA CCCGGCCGCG
CCCGAAACCC TGCTCGCGCA GATGAACGCC GAGGGCATCG TCGGCATCCG CCTGAACCTG
ATCGGTGCGG CAGACCCGCA ATTGAAATCG CCCGTGTGGC AAGCCTCGCT GGCACGCCTG
CATGCGCTGG GCTGGCATGT GGAACTGCAC GTCGAGGCAC GCCGCCTGCC CGCGCTGCTG
CAGCCGCTGC AGGAAGCGCA GGTGAACGTG GTGGTCGATC ATTTCGGCCG TCCCGACCCG
GCACTCGGCG TGGACGACCC CGGCTTTGCC GCATTGCTCG CCGCCGGCCG CTCGCGCCGC
GTGTGGGTGA AGATTTCCGG TGCCTACCGG AATGGCGCCA ACGGACGCGG CGAAGCCATC
GCGCAGGCCG CCATGCCGCG CCTGAAAGAT GCGCTCGGCC TGGACCGCCT GGTATGGGGC
AGCGACTGGC CGCACACGCA GTTCGAATCG CAGATCGACT ACGACAAGAT GTGGGCCTTC
GCCGGCGTGC TCCTGCCCAG CGCAGCGGAC CGCAAGCAGG TGCTGGTCGA CACGCCCGCG
CAATTGTTCC GCTTCGGCTG A
 
Protein sequence
MPTRRAFNTG LLAMLGSTAL AGCAATGNSD ATRGTSAGIT AIDTHAHVFE RGLPLADARR 
YAPTYDAPLP AYLAQLDAHG VSHGVLVQPS FLGVDNSYLL AALKQAPQRL RGVAVIDPAA
PETLLAQMNA EGIVGIRLNL IGAADPQLKS PVWQASLARL HALGWHVELH VEARRLPALL
QPLQEAQVNV VVDHFGRPDP ALGVDDPGFA ALLAAGRSRR VWVKISGAYR NGANGRGEAI
AQAAMPRLKD ALGLDRLVWG SDWPHTQFES QIDYDKMWAF AGVLLPSAAD RKQVLVDTPA
QLFRFG