Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3931 |
Symbol | |
ID | 6285113 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 175668 |
End bp | 176588 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642618422 |
Product | amidohydrolase 2 |
Protein accession | YP_001892463 |
Protein GI | 187926118 |
COG category | [R] General function prediction only |
COG ID | [COG3618] Predicted metal-dependent hydrolase of the TIM-barrel fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.788161 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCACCC GCCGCGCCTT CAACACCGGA TTGCTTGCCA TGCTAGGTTC CACCGCCCTT GCCGGCTGCG CCGCCACCGG CAACAGCGAC GCCACGCGCG GCACTTCCGC GGGCATCACT GCCATCGATA CGCATGCGCA TGTATTCGAG CGCGGCTTGC CGCTGGCCGA TGCGCGCCGC TATGCGCCCA CGTATGACGC GCCGCTGCCG GCCTACCTGG CGCAGCTCGA CGCGCATGGC GTGTCGCACG GTGTGCTGGT CCAGCCGAGC TTCCTGGGCG TCGACAACAG CTACCTGCTG GCCGCGCTCA AACAGGCGCC GCAGCGCTTG CGCGGCGTGG CCGTCATCGA CCCGGCCGCG CCCGAAACCC TGCTCGCGCA GATGAACGCC GAGGGCATCG TCGGCATCCG CCTGAACCTG ATCGGTGCGG CAGACCCGCA ATTGAAATCG CCCGTGTGGC AAGCCTCGCT GGCACGCCTG CATGCGCTGG GCTGGCATGT GGAACTGCAC GTCGAGGCAC GCCGCCTGCC CGCGCTGCTG CAGCCGCTGC AGGAAGCGCA GGTGAACGTG GTGGTCGATC ATTTCGGCCG TCCCGACCCG GCACTCGGCG TGGACGACCC CGGCTTTGCC GCATTGCTCG CCGCCGGCCG CTCGCGCCGC GTGTGGGTGA AGATTTCCGG TGCCTACCGG AATGGCGCCA ACGGACGCGG CGAAGCCATC GCGCAGGCCG CCATGCCGCG CCTGAAAGAT GCGCTCGGCC TGGACCGCCT GGTATGGGGC AGCGACTGGC CGCACACGCA GTTCGAATCG CAGATCGACT ACGACAAGAT GTGGGCCTTC GCCGGCGTGC TCCTGCCCAG CGCAGCGGAC CGCAAGCAGG TGCTGGTCGA CACGCCCGCG CAATTGTTCC GCTTCGGCTG A
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Protein sequence | MPTRRAFNTG LLAMLGSTAL AGCAATGNSD ATRGTSAGIT AIDTHAHVFE RGLPLADARR YAPTYDAPLP AYLAQLDAHG VSHGVLVQPS FLGVDNSYLL AALKQAPQRL RGVAVIDPAA PETLLAQMNA EGIVGIRLNL IGAADPQLKS PVWQASLARL HALGWHVELH VEARRLPALL QPLQEAQVNV VVDHFGRPDP ALGVDDPGFA ALLAAGRSRR VWVKISGAYR NGANGRGEAI AQAAMPRLKD ALGLDRLVWG SDWPHTQFES QIDYDKMWAF AGVLLPSAAD RKQVLVDTPA QLFRFG
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